RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	MMP20	O60882	483 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	RARA	P10276	462 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	RBM6	P78332	1123 aa	Known RBP	7	□□□□□ -1.29
BBS4-208	ENST00000565160	C8orf34	Q49A92	452 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	GJD3	Q8N144	294 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	TMEM63C	Q9P1W3	806 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	BRPF3	Q9ULD4	1205 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	FAM135A	Q9P2D6	1515 aa		7	□□□□□ -1.29
BBS4-208	ENST00000565160	NCOA2	Q15596	1464 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	SCAF11	Q99590	1463 aa	Known RBP	6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	BCR	P11274	1271 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	EPX	P11678	715 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	SND1	Q7KZF4	910 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	NLRP13	Q86W25	1043 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	ZSCAN1	Q8NBB4	408 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	TNFRSF25	Q93038	417 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	GZF1	Q9H116	711 aa	Predicted RBP	6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	EFCC1	Q9HA90	598 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	SLIT1	O75093	1534 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	PRDM15	P57071	1507 aa	Predicted RBP	6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	MIA2	Q96PC5	1412 aa		6.99	□□□□□ -1.29
BBS4-208	ENST00000565160	A2M	P01023	1474 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	TET3	O43151	1660 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	ADARB2-AS1	A8MUL3	147 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	ZBTB42	B2RXF5	422 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	NDUFB5	O43674	189 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	ARHGEF15	O94989	841 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	MAP3K6	O95382	1288 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	IGHA2	P01877	340 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	PCSK2	P16519	638 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	NEUROD1	Q13562	356 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	XKR5	Q6UX68	686 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	DHX32	Q7L7V1	743 aa	Known RBP	6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	SVOP	Q8N4V2	548 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	GALNT6	Q8NCL4	622 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	EDARADD	Q8WWZ3	215 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	ELP3	Q9H9T3	547 aa		6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	6.98	□□□□□ -1.29
BBS4-208	ENST00000565160	ABCC3	O15438	1527 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	RPLP1	P05386	114 aa	Known RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	LTK	P29376	864 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	USP5	P45974	858 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	INSM1	Q01101	510 aa	Predicted RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	TBC1D8B	Q0IIM8	1120 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	TRIM26	Q12899	539 aa	Predicted RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	SPHKAP	Q2M3C7	1700 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	PDE12	Q6L8Q7	609 aa	Known RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	ZNF438	Q7Z4V0	828 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	FAM129B	Q96TA1	746 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	UBE2O	Q9C0C9	1292 aa	Known RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	IGFLR1	Q9H665	355 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	DNAJB12	Q9NXW2	375 aa	Known RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	ABI2	Q9NYB9	513 aa	Predicted RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	TLR7	Q9NYK1	1049 aa	Known RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	CNTN3	Q9P232	1028 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	DCTN4	Q9UJW0	460 aa		6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.97	□□□□□ -1.29
BBS4-208	ENST00000565160	MARF1	Q9Y4F3	1742 aa	Known RBP	6.96	□□□□□ -1.29
BBS4-208	ENST00000565160	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	GPR182	O15218	404 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	CYP2E1	P05181	493 aa	Predicted RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	MAPK1	P28482	360 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	ADH7	P40394	386 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	MLLT1	Q03111	559 aa	Predicted RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	ELOA3B	Q3SY89	546 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	MEX3C	Q5U5Q3	659 aa	Known RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	ELOA3	Q8NG57	546 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	RBCK1	Q9BYM8	510 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	NAGPA	Q9UK23	515 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	STARD13	Q9Y3M8	1113 aa		6.96	□□□□□ -1.3
BBS4-208	ENST00000565160	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	TMC7	Q7Z402	723 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	DEFB132	Q7Z7B7	95 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	C1orf127	Q8N9H9	656 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	OR13H1	Q8NG92	308 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	TRPM4	Q8TD43	1214 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	BTBD6	Q96KE9	485 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	CITED4	Q96RK1	184 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	CHRD	Q9H2X0	955 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	LRRC4B	Q9NT99	713 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	SLC6A14	Q9UN76	642 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	SYCP2	Q9BX26	1530 aa		6.95	□□□□□ -1.3
BBS4-208	ENST00000565160	BLM	P54132	1417 aa	Predicted RBP	6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	NKTR	P30414	1462 aa	Known RBP	6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	ZBTB7C	A1YPR0	619 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	TNFRSF21	O75509	655 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	HOXB4	P17483	251 aa	Predicted RBP	6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	SOX18	P35713	384 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	NRL	P54845	237 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	MARS	P56192	900 aa	Known RBP	6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	C1QTNF8	P60827	252 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	GPLD1	P80108	840 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	MAP3K10	Q02779	954 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	HFE2	Q6ZVN8	426 aa		6.94	□□□□□ -1.3
BBS4-208	ENST00000565160	TTC16	Q8NEE8	873 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms