RNA–Protein interactions for RNA: ENST00000564942.1

HEATR3-204, Transcript of HEAT repeat containing 3, human

TSL 5

Gene HEATR3, Length 801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HEATR3-204	ENST00000564942	SNRPA1	P09661	255 aa	Known RBP	10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	SKI	P12755	728 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	EPS15	P42566	896 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	HLF	Q16534	295 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	LARGE2	Q8N3Y3	721 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	RTF1	Q92541	710 aa	Known RBP	10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	PHACTR3	Q96KR7	559 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	KIAA1468	Q9P260	1216 aa		10.28	□□□□□ -0.76
HEATR3-204	ENST00000564942	DICER1	Q9UPY3	1922 aa	Known RBP	10.27	□□□□□ -0.76
HEATR3-204	ENST00000564942	TRAF5	O00463	557 aa		10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	PER1	O15534	1290 aa	Predicted RBP	10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	HOXB3	P14651	431 aa	Predicted RBP	10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	PRKAR2B	P31323	418 aa		10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	MCM10	Q7L590	875 aa		10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	SYMPK	Q92797	1274 aa	Known RBP	10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	RPGR	Q92834	1020 aa	Known RBP	10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	KCNK17	Q96T54	332 aa		10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	PSMD1	Q99460	953 aa		10.27	□□□□□ -0.77
HEATR3-204	ENST00000564942	SCN7A	Q01118	1682 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L5	A8MUK1	530 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	PIK3CD	O00329	1044 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	CFH	P08603	1231 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	CST9	Q5W186	159 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	NBPF10	Q6P3W6	841 aa	Known RBP	10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP50	Q70EL3	339 aa	Predicted RBP	10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	NBPF15	Q8N660	670 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	KIF7	Q2M1P5	1343 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	SCN4A	P35499	1836 aa		10.26	□□□□□ -0.77
HEATR3-204	ENST00000564942	UBR2	Q8IWV8	1755 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	FAM196B	A6NMK8	535 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	ZBBX	A8MT70	800 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	HMGB1	P09429	215 aa	Known RBP	10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	FBXO45	P0C2W1	286 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	SCNN1D	P51172	638 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	DCTN1	Q14203	1278 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	CC2D2B	Q6DHV5	1058 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	RETREG3	Q86VR2	466 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	PLEKHM2	Q8IWE5	1019 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	NIM1K	Q8IY84	436 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	NYX	Q9GZU5	481 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	TMX4	Q9H1E5	349 aa	Predicted RBP	10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	ZNF408	Q9H9D4	720 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	MIS18A	Q9NYP9	233 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	TLL2	Q9Y6L7	1015 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	CEMIP	Q8WUJ3	1361 aa		10.25	□□□□□ -0.77
HEATR3-204	ENST00000564942	CACNA1S	Q13698	1873 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L15	C9J2P7	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L10	C9JJH3	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L13	C9JLJ4	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L12	C9JPN9	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L11	C9JVI0	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L21	D6R901	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L18	D6R9N7	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L22	D6RA61	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L17	D6RBQ6	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L19	D6RCP7	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L20	D6RJB6	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	CELF2	O95319	508 aa	Known RBP	10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	USP17L24	Q0WX57	530 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	MRRF	Q96E11	262 aa	Known RBP	10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	RBM17	Q96I25	401 aa	Known RBP	10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	MCOLN1	Q9GZU1	580 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	CLSPN	Q9HAW4	1339 aa		10.24	□□□□□ -0.77
HEATR3-204	ENST00000564942	PPEF1	O14829	653 aa	Predicted RBP	10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	PPIP5K2	O43314	1243 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	GPT	P24298	496 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	MAP2K2	P36507	400 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	RGS19	P49795	217 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	PHLDB3	Q6NSJ2	640 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	KIF6	Q6ZMV9	814 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	SLC51A	Q86UW1	340 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	CFAP53	Q96M91	514 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	ADARB2	Q9NS39	739 aa	Known RBP	10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	NUDC	Q9Y266	331 aa		10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	RRP7A	Q9Y3A4	280 aa	Known RBP	10.23	□□□□□ -0.77
HEATR3-204	ENST00000564942	VIRMA	Q69YN4	1812 aa	Known RBP	10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	MYL6B	P14649	208 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	DGKZ	Q13574	1117 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	AOC3	Q16853	763 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942		Q3C1V9	767 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	CRY2	Q49AN0	593 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	DESI1	Q6ICB0	168 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	DEPDC4	Q8N2C3	294 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	FAM200A	Q8TCP9	573 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	BCL2L13	Q9BXK5	485 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	ABCC12	Q96J65	1359 aa		10.22	□□□□□ -0.77
HEATR3-204	ENST00000564942	SOWAHD	A6NJG2	315 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	RNF40	O75150	1001 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	RASA1	P20936	1047 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	HOXA10	P31260	410 aa	Predicted RBP	10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	MARS	P56192	900 aa	Known RBP	10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	TAF7	Q15545	349 aa	Predicted RBP	10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	SUSD4	Q5VX71	490 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	CIAPIN1	Q6FI81	312 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	TTLL7	Q6ZT98	887 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	SAPCD2	Q86UD0	394 aa		10.21	□□□□□ -0.77
HEATR3-204	ENST00000564942	SCUBE2	Q9NQ36	999 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms