RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
SF3B3-205ENST00000564899 ERC2O15083 957 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
SF3B3-205ENST00000564899 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 TMC4Q7Z404 712 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 LPIN2Q92539 896 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 SPEF2Q9C093 1822 aa13.54□□□□□ -0.24
SF3B3-205ENST00000564899 IFIT1P09914 478 aaKnown RBP13.53□□□□□ -0.24
SF3B3-205ENST00000564899 SLC5A1P13866 664 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 FGFR2P21802 821 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 ADORA1P30542 326 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 DLK2Q6UY11 383 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 PI4K2BQ8TCG2 481 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 ZIC5Q96T25 663 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 PSMD1Q99460 953 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
SF3B3-205ENST00000564899 GLRX3O76003 335 aaKnown RBP13.52□□□□□ -0.25
SF3B3-205ENST00000564899 KCNJ4P48050 445 aa13.52□□□□□ -0.25
SF3B3-205ENST00000564899 UBE4AQ14139 1066 aa13.52□□□□□ -0.25
SF3B3-205ENST00000564899 TAF1P21675 1872 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 XDHP47989 1333 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 SNAP23O00161 211 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 CCDC158Q5M9N0 1113 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
SF3B3-205ENST00000564899 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 ATP5JP18859 108 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 GPSM2P81274 684 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 SAPCD2Q86UD0 394 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 SP8Q8IXZ3 490 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
SF3B3-205ENST00000564899 GLIS2Q9BZE0 524 aaPredicted RBP13.5□□□□□ -0.25
SF3B3-205ENST00000564899 TMX4Q9H1E5 349 aaPredicted RBP13.5□□□□□ -0.25
SF3B3-205ENST00000564899 ZNF804BA4D1E1 1349 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 SDSP20132 328 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
SF3B3-205ENST00000564899 AOC3Q16853 763 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
SF3B3-205ENST00000564899 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
SF3B3-205ENST00000564899 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 UFL1O94874 794 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
SF3B3-205ENST00000564899 MAP4K4O95819 1239 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-205ENST00000564899 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-205ENST00000564899 ECE1P42892 770 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 HIRAP54198 1017 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-205ENST00000564899 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.48□□□□□ -0.25
SF3B3-205ENST00000564899 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 GGA1Q9UJY5 639 aa13.48□□□□□ -0.25
SF3B3-205ENST00000564899 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 WTIPA6NIX2 430 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-205ENST00000564899 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 PHKA1P46020 1223 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-205ENST00000564899 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-205ENST00000564899 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
SF3B3-205ENST00000564899 HAUS7Q99871 368 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
SF3B3-205ENST00000564899 CDC45O75419 566 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 KLRK1P26718 216 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 ARID4AP29374 1257 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-205ENST00000564899 GYG1P46976 350 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-205ENST00000564899 BCAMP50895 628 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 CXCL9Q07325 125 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 DGKZQ13574 1117 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-205ENST00000564899 VPS37DQ86XT2 251 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 MPNDQ8N594 471 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 TBC1D16Q8TBP0 767 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 TRPM4Q8TD43 1214 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
SF3B3-205ENST00000564899 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
SF3B3-205ENST00000564899 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
SF3B3-205ENST00000564899 MAP2K2P36507 400 aa13.45□□□□□ -0.26
SF3B3-205ENST00000564899 GNL3LQ9NVN8 582 aaKnown RBP13.45□□□□□ -0.26
SF3B3-205ENST00000564899 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
SF3B3-205ENST00000564899 IRS2Q9Y4H2 1338 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 GOLIM4O00461 696 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 HIBADHP31937 336 aaKnown RBP13.44□□□□□ -0.26
SF3B3-205ENST00000564899 MCAMP43121 646 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms