RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PAPPA2Q9BXP8 1791 aa23.36■■□□□ 1.33
CLN6-204ENST00000564752 AKAP11Q9UKA4 1901 aa23.35■■□□□ 1.33
CLN6-204ENST00000564752 FKBP1AP62942 108 aaKnown RBP23.35■■□□□ 1.33
CLN6-204ENST00000564752 SLFN5Q08AF3 891 aa23.35■■□□□ 1.33
CLN6-204ENST00000564752 TTLL12Q14166 644 aaPredicted RBP23.35■■□□□ 1.33
CLN6-204ENST00000564752 DLGAP5Q15398 846 aa23.35■■□□□ 1.33
CLN6-204ENST00000564752 MTMR14Q8NCE2 650 aa23.35■■□□□ 1.33
CLN6-204ENST00000564752 SUCLG2Q96I99 432 aa23.35■■□□□ 1.33
CLN6-204ENST00000564752 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
CLN6-204ENST00000564752 MRPL50Q8N5N7 158 aaKnown RBP23.34■■□□□ 1.33
CLN6-204ENST00000564752 UTYO14607 1347 aa23.33■■□□□ 1.33
CLN6-204ENST00000564752 RGS19P49795 217 aa23.33■■□□□ 1.33
CLN6-204ENST00000564752 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
CLN6-204ENST00000564752 PUS3Q9BZE2 481 aaKnown RBP23.32■■□□□ 1.32
CLN6-204ENST00000564752 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
CLN6-204ENST00000564752 ARMC9Q7Z3E5 817 aa23.31■■□□□ 1.32
CLN6-204ENST00000564752 CDCA7LQ96GN5 454 aa23.31■■□□□ 1.32
CLN6-204ENST00000564752 DEFB129Q9H1M3 183 aa23.31■■□□□ 1.32
CLN6-204ENST00000564752 PCDHAC2Q9Y5I4 1007 aa23.31■■□□□ 1.32
CLN6-204ENST00000564752 PTPN12Q05209 780 aaKnown RBP23.3■■□□□ 1.32
CLN6-204ENST00000564752 CFAP100Q494V2 611 aa23.3■■□□□ 1.32
CLN6-204ENST00000564752 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
CLN6-204ENST00000564752 JAG2Q9Y219 1238 aa23.3■■□□□ 1.32
CLN6-204ENST00000564752 RIPOR2Q9Y4F9 1068 aa23.3■■□□□ 1.32
CLN6-204ENST00000564752 FAM205AQ6ZU69 1335 aa23.3■■□□□ 1.32
CLN6-204ENST00000564752 SPDYE2BA6NHP3 402 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 SPDYE6P0CI01 402 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 TM4SF4P48230 202 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 PRKG1Q13976 671 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 RABL6Q3YEC7 729 aaPredicted RBP23.29■■□□□ 1.32
CLN6-204ENST00000564752 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 TDRD7Q8NHU6 1098 aaKnown RBP23.29■■□□□ 1.32
CLN6-204ENST00000564752 FAM84BQ96KN1 310 aaPredicted RBP23.29■■□□□ 1.32
CLN6-204ENST00000564752 PRMT6Q96LA8 375 aaPredicted RBP23.29■■□□□ 1.32
CLN6-204ENST00000564752 BICC1Q9H694 974 aaKnown RBP23.29■■□□□ 1.32
CLN6-204ENST00000564752 PTPRCP08575 1304 aa23.29■■□□□ 1.32
CLN6-204ENST00000564752 SLC34A2O95436 690 aa23.28■■□□□ 1.32
CLN6-204ENST00000564752 HIBADHP31937 336 aaKnown RBP23.28■■□□□ 1.32
CLN6-204ENST00000564752 PPP2R3BQ9Y5P8 575 aa23.28■■□□□ 1.32
CLN6-204ENST00000564752 MYO1BO43795 1136 aa23.27■■□□□ 1.32
CLN6-204ENST00000564752 GYG1P46976 350 aa23.27■■□□□ 1.32
CLN6-204ENST00000564752 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
CLN6-204ENST00000564752 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
CLN6-204ENST00000564752 ANGEL1Q9UNK9 670 aaKnown RBP23.27■■□□□ 1.32
CLN6-204ENST00000564752 COL1A1P02452 1464 aaPredicted RBP23.27■■□□□ 1.32
CLN6-204ENST00000564752 MROH5Q6ZUA9 1318 aa23.27■■□□□ 1.32
CLN6-204ENST00000564752 MAP3K11Q16584 847 aa23.26■■□□□ 1.31
CLN6-204ENST00000564752 CLRN2A0PK11 232 aa23.25■■□□□ 1.31
CLN6-204ENST00000564752 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
CLN6-204ENST00000564752 MKRN3Q13064 507 aaKnown RBP23.25■■□□□ 1.31
CLN6-204ENST00000564752 MFSD14BQ5SR56 506 aa23.25■■□□□ 1.31
CLN6-204ENST00000564752 FZD1Q9UP38 647 aa23.25■■□□□ 1.31
CLN6-204ENST00000564752 AOX1Q06278 1338 aa23.25■■□□□ 1.31
CLN6-204ENST00000564752 TBC1D8O95759 1140 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 RBM5P52756 815 aaKnown RBP eCLIP23.24■■□□□ 1.31
CLN6-204ENST00000564752 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 SPRYD7Q5W111 196 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 CTU1Q7Z7A3 348 aaKnown RBP23.24■■□□□ 1.31
CLN6-204ENST00000564752 TRMT2AQ8IZ69 625 aaKnown RBP23.24■■□□□ 1.31
CLN6-204ENST00000564752 MIER1Q8N108 512 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 USP44Q9H0E7 712 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 A0A1B0GUL6 1792 aa23.24■■□□□ 1.31
CLN6-204ENST00000564752 SREBF2Q12772 1141 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 SUPT20HL1Q3ZLR7 823 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 VEZTQ9HBM0 779 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 SERPINA10Q9UK55 444 aa23.23■■□□□ 1.31
CLN6-204ENST00000564752 PPP1R12BO60237 982 aaPredicted RBP23.22■■□□□ 1.31
CLN6-204ENST00000564752 SLC10A4Q96EP9 437 aa23.22■■□□□ 1.31
CLN6-204ENST00000564752 TTF2Q9UNY4 1162 aaKnown RBP23.22■■□□□ 1.31
CLN6-204ENST00000564752 UNCXA6NJT0 531 aa23.21■■□□□ 1.31
CLN6-204ENST00000564752 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
CLN6-204ENST00000564752 RASA3Q14644 834 aa23.21■■□□□ 1.31
CLN6-204ENST00000564752 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
CLN6-204ENST00000564752 NBPF12Q5TAG4 269 aaPredicted RBP23.21■■□□□ 1.31
CLN6-204ENST00000564752 VGLL2Q8N8G2 317 aa23.21■■□□□ 1.31
CLN6-204ENST00000564752 ZNF296Q8WUU4 475 aaPredicted RBP23.21■■□□□ 1.31
CLN6-204ENST00000564752 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
CLN6-204ENST00000564752 PDE8BO95263 885 aa23.2■■□□□ 1.3
CLN6-204ENST00000564752 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
CLN6-204ENST00000564752 CFHR5Q9BXR6 569 aa23.2■■□□□ 1.3
CLN6-204ENST00000564752 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
CLN6-204ENST00000564752 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
CLN6-204ENST00000564752 VPS37DQ86XT2 251 aa23.19■■□□□ 1.3
CLN6-204ENST00000564752 KLHDC4Q8TBB5 520 aa23.19■■□□□ 1.3
CLN6-204ENST00000564752 CLMNQ96JQ2 1002 aa23.19■■□□□ 1.3
CLN6-204ENST00000564752 GPR25O00155 361 aa23.18■■□□□ 1.3
CLN6-204ENST00000564752 USP2O75604 605 aaPredicted RBP23.18■■□□□ 1.3
CLN6-204ENST00000564752 INHBEP58166 350 aa23.18■■□□□ 1.3
CLN6-204ENST00000564752 TNFAIP1Q13829 316 aa23.18■■□□□ 1.3
CLN6-204ENST00000564752 CAVIN4Q5BKX8 364 aa23.18■■□□□ 1.3
CLN6-204ENST00000564752 DZIP1LQ8IYY4 767 aaKnown RBP23.18■■□□□ 1.3
CLN6-204ENST00000564752 TDRD3Q9H7E2 651 aaKnown RBP23.18■■□□□ 1.3
CLN6-204ENST00000564752 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
CLN6-204ENST00000564752 MANSC4A6NHS7 340 aaPredicted RBP23.17■■□□□ 1.3
CLN6-204ENST00000564752 ZBTB48P10074 688 aaPredicted RBP23.17■■□□□ 1.3
CLN6-204ENST00000564752 CRKP46108 304 aa23.17■■□□□ 1.3
CLN6-204ENST00000564752 IREB2P48200 963 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms