RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 FRAT1Q92837 279 aaPredicted RBP25■■□□□ 1.59
SHCBP1-203ENST00000564272 AIDAQ96BJ3 306 aa25■■□□□ 1.59
SHCBP1-203ENST00000564272 FAM84BQ96KN1 310 aaPredicted RBP25■■□□□ 1.59
SHCBP1-203ENST00000564272 F8W031 263 aaPredicted RBP24.99■■□□□ 1.59
SHCBP1-203ENST00000564272 PDE8BO95263 885 aa24.99■■□□□ 1.59
SHCBP1-203ENST00000564272 TRIM27P14373 513 aa24.99■■□□□ 1.59
SHCBP1-203ENST00000564272 INTS3Q68E01 1043 aaKnown RBP24.99■■□□□ 1.59
SHCBP1-203ENST00000564272 TDRD7Q8NHU6 1098 aaKnown RBP24.99■■□□□ 1.59
SHCBP1-203ENST00000564272 MMP14P50281 582 aa24.98■■□□□ 1.59
SHCBP1-203ENST00000564272 PTPN12Q05209 780 aaKnown RBP24.98■■□□□ 1.59
SHCBP1-203ENST00000564272 C2orf69Q8N8R5 385 aa24.98■■□□□ 1.59
SHCBP1-203ENST00000564272 ZBED3Q96IU2 234 aaPredicted RBP24.98■■□□□ 1.59
SHCBP1-203ENST00000564272 ARAP2Q8WZ64 1704 aa24.98■■□□□ 1.59
SHCBP1-203ENST00000564272 FAM205AQ6ZU69 1335 aa24.97■■□□□ 1.59
SHCBP1-203ENST00000564272 EYA2O00167 538 aa24.97■■□□□ 1.59
SHCBP1-203ENST00000564272 FKBP1AP62942 108 aaKnown RBP24.97■■□□□ 1.59
SHCBP1-203ENST00000564272 IPO8O15397 1037 aaKnown RBP24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 MAP2K1Q02750 393 aaPredicted RBP24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 PRAMEF18Q5VWM3 479 aa24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 ATF7IPQ6VMQ6 1270 aa24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 SIL1Q9H173 461 aa24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 IQSEC3Q9UPP2 1182 aaPredicted RBP24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 PCDHAC2Q9Y5I4 1007 aa24.96■■□□□ 1.59
SHCBP1-203ENST00000564272 ZBED9Q6R2W3 1325 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 PUM3Q15397 648 aaKnown RBP24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 MFSD14BQ5SR56 506 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 IFFO2Q5TF58 517 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 ATG9AQ7Z3C6 839 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 FBXO33Q7Z6M2 555 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 VPS37DQ86XT2 251 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 CLUAP1Q96AJ1 413 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 PAPPA2Q9BXP8 1791 aa24.95■■□□□ 1.58
SHCBP1-203ENST00000564272 DLGAP5Q15398 846 aa24.94■■□□□ 1.58
SHCBP1-203ENST00000564272 HDAC5Q9UQL6 1122 aa24.94■■□□□ 1.58
SHCBP1-203ENST00000564272 ECM29Q5VYK3 1845 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 FGFR2P21802 821 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 MAP2K2P36507 400 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 CTCFP49711 727 aaPredicted RBP24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 CFAP100Q494V2 611 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 CAVIN4Q5BKX8 364 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 RGMBQ6NW40 437 aa24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 PA2G4Q9UQ80 394 aaKnown RBP24.93■■□□□ 1.58
SHCBP1-203ENST00000564272 AOX1Q06278 1338 aa24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 GNAI3P08754 354 aa24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 BCAMP50895 628 aa24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 CHAF1AQ13111 956 aaPredicted RBP24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 APOBEC3FQ8IUX4 373 aaKnown RBP24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 MTMR14Q8NCE2 650 aa24.92■■□□□ 1.58
SHCBP1-203ENST00000564272 IFIT1P09914 478 aaKnown RBP24.91■■□□□ 1.58
SHCBP1-203ENST00000564272 MOB2Q70IA6 237 aa24.91■■□□□ 1.58
SHCBP1-203ENST00000564272 ZIC5Q96T25 663 aa24.91■■□□□ 1.58
SHCBP1-203ENST00000564272 SPDYE2BA6NHP3 402 aa24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 CIAO1O76071 339 aa24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 SPDYE6P0CI01 402 aa24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 HSPA8P11142 646 aaKnown RBP24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 LBX1P52954 281 aa24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 ZKSCAN2Q63HK3 967 aa24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 TTF2Q9UNY4 1162 aaKnown RBP24.9■■□□□ 1.58
SHCBP1-203ENST00000564272 CLRN2A0PK11 232 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 FAM155AB1AL88 458 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 FRAT2O75474 233 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 SLC5A1P13866 664 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 ZNF157P51786 506 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 RBM5P52756 815 aaKnown RBP eCLIP24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 NOGQ13253 232 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 GRIK5Q16478 980 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 PRMT6Q96LA8 375 aaPredicted RBP24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 BEGAINQ9BUH8 593 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 FBXO3Q9UK99 471 aa24.89■■□□□ 1.58
SHCBP1-203ENST00000564272 FKBP1BP68106 108 aa24.88■■□□□ 1.57
SHCBP1-203ENST00000564272 TNS4Q8IZW8 715 aa24.88■■□□□ 1.57
SHCBP1-203ENST00000564272 TMEM57Q8N5G2 664 aa24.88■■□□□ 1.57
SHCBP1-203ENST00000564272 LPIN2Q92539 896 aa24.88■■□□□ 1.57
SHCBP1-203ENST00000564272 SRGAP3O43295 1099 aa24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 ATP2B3Q16720 1220 aa24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 COPRSQ9NQ92 184 aa24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 PRDM10Q9NQV6 1147 aa24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 CEP126Q9P2H0 1117 aa24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 COL1A1P02452 1464 aaPredicted RBP24.87■■□□□ 1.57
SHCBP1-203ENST00000564272 MYH13Q9UKX3 1938 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 MYO1BO43795 1136 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 SLC10A3P09131 477 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 NF2P35240 595 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 IL15P40933 162 aaPredicted RBP24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 TTLL12Q14166 644 aaPredicted RBP24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 CCDC102AQ96A19 550 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 VEZTQ9HBM0 779 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 TSKSQ9UJT2 592 aa24.86■■□□□ 1.57
SHCBP1-203ENST00000564272 UBE2Q2LH0YL09 131 aa24.85■■□□□ 1.57
SHCBP1-203ENST00000564272 MTX1Q13505 466 aa24.85■■□□□ 1.57
SHCBP1-203ENST00000564272 RASAL3Q86YV0 1011 aa24.85■■□□□ 1.57
SHCBP1-203ENST00000564272 DEFB129Q9H1M3 183 aa24.85■■□□□ 1.57
SHCBP1-203ENST00000564272 SERPINA10Q9UK55 444 aa24.85■■□□□ 1.57
SHCBP1-203ENST00000564272 GNAI2P04899 355 aa24.84■■□□□ 1.57
SHCBP1-203ENST00000564272 TBC1D22AQ8WUA7 517 aa24.84■■□□□ 1.57
SHCBP1-203ENST00000564272 CRKP46108 304 aa24.83■■□□□ 1.57
SHCBP1-203ENST00000564272 PRKG1Q13976 671 aa24.83■■□□□ 1.57
SHCBP1-203ENST00000564272 SSC5DA1L4H1 1573 aa24.83■■□□□ 1.57
SHCBP1-203ENST00000564272 KIF23Q02241 960 aaPredicted RBP24.82■■□□□ 1.56
SHCBP1-203ENST00000564272 FTSJ3Q8IY81 847 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms