RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 DGKZQ13574 1117 aa30.19■■■□□ 2.42
NME3-206ENST00000564252 MRPL50Q8N5N7 158 aaKnown RBP30.19■■■□□ 2.42
NME3-206ENST00000564252 MTMR14Q8NCE2 650 aa30.19■■■□□ 2.42
NME3-206ENST00000564252 UTYO14607 1347 aa30.19■■■□□ 2.42
NME3-206ENST00000564252 NBPF7P0C2Y1 421 aaPredicted RBP30.18■■■□□ 2.42
NME3-206ENST00000564252 TTLL12Q14166 644 aaPredicted RBP30.18■■■□□ 2.42
NME3-206ENST00000564252 FKBP1AP62942 108 aaKnown RBP30.17■■■□□ 2.42
NME3-206ENST00000564252 DLGAP5Q15398 846 aa30.17■■■□□ 2.42
NME3-206ENST00000564252 ECM29Q5VYK3 1845 aa30.17■■■□□ 2.42
NME3-206ENST00000564252 PCDHAC2Q9Y5I4 1007 aa30.16■■■□□ 2.42
NME3-206ENST00000564252 COL1A1P02452 1464 aaPredicted RBP30.16■■■□□ 2.42
NME3-206ENST00000564252 PUS3Q9BZE2 481 aaKnown RBP30.15■■■□□ 2.42
NME3-206ENST00000564252 JAG2Q9Y219 1238 aa30.15■■■□□ 2.42
NME3-206ENST00000564252 E9PSI1 815 aa30.14■■■□□ 2.42
NME3-206ENST00000564252 F8W031 263 aaPredicted RBP30.14■■■□□ 2.42
NME3-206ENST00000564252 UBE4AQ14139 1066 aa30.14■■■□□ 2.42
NME3-206ENST00000564252 CFAP100Q494V2 611 aa30.13■■■□□ 2.41
NME3-206ENST00000564252 BICC1Q9H694 974 aaKnown RBP30.13■■■□□ 2.41
NME3-206ENST00000564252 RABL6Q3YEC7 729 aaPredicted RBP30.12■■■□□ 2.41
NME3-206ENST00000564252 ARMC9Q7Z3E5 817 aa30.12■■■□□ 2.41
NME3-206ENST00000564252 DEFB129Q9H1M3 183 aa30.12■■■□□ 2.41
NME3-206ENST00000564252 RIPOR2Q9Y4F9 1068 aa30.12■■■□□ 2.41
NME3-206ENST00000564252 PTPRCP08575 1304 aa30.12■■■□□ 2.41
NME3-206ENST00000564252 SPDYE2BA6NHP3 402 aa30.11■■■□□ 2.41
NME3-206ENST00000564252 SPDYE6P0CI01 402 aa30.11■■■□□ 2.41
NME3-206ENST00000564252 PTPN12Q05209 780 aaKnown RBP30.11■■■□□ 2.41
NME3-206ENST00000564252 PRKG1Q13976 671 aa30.11■■■□□ 2.41
NME3-206ENST00000564252 SSH1Q8WYL5 1049 aa30.11■■■□□ 2.41
NME3-206ENST00000564252 FAM205AQ6ZU69 1335 aa30.11■■■□□ 2.41
NME3-206ENST00000564252 LDLRAD1Q5T700 205 aa30.1■■■□□ 2.41
NME3-206ENST00000564252 ANKRD44Q8N8A2 993 aa30.1■■■□□ 2.41
NME3-206ENST00000564252 TDRD7Q8NHU6 1098 aaKnown RBP30.1■■■□□ 2.41
NME3-206ENST00000564252 FAM84BQ96KN1 310 aaPredicted RBP30.1■■■□□ 2.41
NME3-206ENST00000564252 PRMT6Q96LA8 375 aaPredicted RBP30.1■■■□□ 2.41
NME3-206ENST00000564252 SSC5DA1L4H1 1573 aa30.09■■■□□ 2.41
NME3-206ENST00000564252 GYG1P46976 350 aa30.09■■■□□ 2.41
NME3-206ENST00000564252 RGS19P49795 217 aa30.09■■■□□ 2.41
NME3-206ENST00000564252 AOX1Q06278 1338 aa30.09■■■□□ 2.41
NME3-206ENST00000564252 SLFN5Q08AF3 891 aa30.09■■■□□ 2.41
NME3-206ENST00000564252 MROH5Q6ZUA9 1318 aa30.08■■■□□ 2.41
NME3-206ENST00000564252 HIBADHP31937 336 aaKnown RBP30.08■■■□□ 2.41
NME3-206ENST00000564252 TM4SF4P48230 202 aa30.08■■■□□ 2.41
NME3-206ENST00000564252 ANGEL1Q9UNK9 670 aaKnown RBP30.08■■■□□ 2.41
NME3-206ENST00000564252 FZD1Q9UP38 647 aa30.08■■■□□ 2.41
NME3-206ENST00000564252 PPP2R3BQ9Y5P8 575 aa30.08■■■□□ 2.41
NME3-206ENST00000564252 ARAP2Q8WZ64 1704 aa30.08■■■□□ 2.41
NME3-206ENST00000564252 CLRN2A0PK11 232 aa30.07■■■□□ 2.4
NME3-206ENST00000564252 MYO1BO43795 1136 aa30.07■■■□□ 2.4
NME3-206ENST00000564252 MKRN3Q13064 507 aaKnown RBP30.06■■■□□ 2.4
NME3-206ENST00000564252 LRRC24Q50LG9 513 aa30.06■■■□□ 2.4
NME3-206ENST00000564252 MFSD14BQ5SR56 506 aa30.06■■■□□ 2.4
NME3-206ENST00000564252 MAP3K11Q16584 847 aa30.05■■■□□ 2.4
NME3-206ENST00000564252 RBM5P52756 815 aaKnown RBP eCLIP30.04■■■□□ 2.4
NME3-206ENST00000564252 USP44Q9H0E7 712 aa30.04■■■□□ 2.4
NME3-206ENST00000564252 VEZTQ9HBM0 779 aa30.04■■■□□ 2.4
NME3-206ENST00000564252 TBC1D8O95759 1140 aa30.03■■■□□ 2.4
NME3-206ENST00000564252 SPRYD7Q5W111 196 aa30.03■■■□□ 2.4
NME3-206ENST00000564252 VGLL2Q8N8G2 317 aa30.03■■■□□ 2.4
NME3-206ENST00000564252 CDCA7LQ96GN5 454 aa30.03■■■□□ 2.4
NME3-206ENST00000564252 SREBF2Q12772 1141 aa30.02■■■□□ 2.4
NME3-206ENST00000564252 ALDH1L2Q3SY69 923 aa30.02■■■□□ 2.4
NME3-206ENST00000564252 FBXO33Q7Z6M2 555 aa30.02■■■□□ 2.4
NME3-206ENST00000564252 CTU1Q7Z7A3 348 aaKnown RBP30.02■■■□□ 2.4
NME3-206ENST00000564252 SERPINA10Q9UK55 444 aa30.02■■■□□ 2.4
NME3-206ENST00000564252 TTF2Q9UNY4 1162 aaKnown RBP30.02■■■□□ 2.4
NME3-206ENST00000564252 MLLT1Q03111 559 aaPredicted RBP30.01■■■□□ 2.39
NME3-206ENST00000564252 METTL24Q5JXM2 366 aa30.01■■■□□ 2.39
NME3-206ENST00000564252 PPP1R12BO60237 982 aaPredicted RBP30■■■□□ 2.39
NME3-206ENST00000564252 SUPT20HL1Q3ZLR7 823 aa30■■■□□ 2.39
NME3-206ENST00000564252 NBPF12Q5TAG4 269 aaPredicted RBP30■■■□□ 2.39
NME3-206ENST00000564252 KLHDC4Q8TBB5 520 aa30■■■□□ 2.39
NME3-206ENST00000564252 PDE8BO95263 885 aa29.99■■■□□ 2.39
NME3-206ENST00000564252 RASA3Q14644 834 aa29.99■■■□□ 2.39
NME3-206ENST00000564252 SPDYE2Q495Y8 402 aa29.99■■■□□ 2.39
NME3-206ENST00000564252 TRMT2AQ8IZ69 625 aaKnown RBP29.99■■■□□ 2.39
NME3-206ENST00000564252 ZNF296Q8WUU4 475 aaPredicted RBP29.99■■■□□ 2.39
NME3-206ENST00000564252 IQSEC3Q9UPP2 1182 aaPredicted RBP29.99■■■□□ 2.39
NME3-206ENST00000564252 VPS37DQ86XT2 251 aa29.98■■■□□ 2.39
NME3-206ENST00000564252 SLC10A4Q96EP9 437 aa29.98■■■□□ 2.39
NME3-206ENST00000564252 CLMNQ96JQ2 1002 aa29.98■■■□□ 2.39
NME3-206ENST00000564252 CFHR5Q9BXR6 569 aa29.98■■■□□ 2.39
NME3-206ENST00000564252 ZNF70Q9UC06 446 aaPredicted RBP29.98■■■□□ 2.39
NME3-206ENST00000564252 LAMB1P07942 1786 aa29.98■■■□□ 2.39
NME3-206ENST00000564252 GRIK5Q16478 980 aa29.97■■■□□ 2.39
NME3-206ENST00000564252 NOM1Q5C9Z4 860 aaKnown RBP29.97■■■□□ 2.39
NME3-206ENST00000564252 SMC4Q9NTJ3 1288 aa29.97■■■□□ 2.39
NME3-206ENST00000564252 UNCXA6NJT0 531 aa29.96■■■□□ 2.39
NME3-206ENST00000564252 CAVIN4Q5BKX8 364 aa29.96■■■□□ 2.39
NME3-206ENST00000564252 DZIP1LQ8IYY4 767 aaKnown RBP29.96■■■□□ 2.39
NME3-206ENST00000564252 TDRD3Q9H7E2 651 aaKnown RBP29.96■■■□□ 2.39
NME3-206ENST00000564252 GPR25O00155 361 aa29.95■■■□□ 2.39
NME3-206ENST00000564252 USP2O75604 605 aaPredicted RBP29.95■■■□□ 2.39
NME3-206ENST00000564252 ZBTB48P10074 688 aaPredicted RBP29.95■■■□□ 2.39
NME3-206ENST00000564252 CRKP46108 304 aa29.95■■■□□ 2.39
NME3-206ENST00000564252 TNFAIP1Q13829 316 aa29.95■■■□□ 2.39
NME3-206ENST00000564252 WNK4Q96J92 1243 aa29.95■■■□□ 2.39
NME3-206ENST00000564252 MANSC4A6NHS7 340 aaPredicted RBP29.94■■■□□ 2.38
NME3-206ENST00000564252 RFX5P48382 616 aaPredicted RBP29.94■■■□□ 2.38
NME3-206ENST00000564252 CHAF1AQ13111 956 aaPredicted RBP29.94■■■□□ 2.38
NME3-206ENST00000564252 R3HDMLQ9H3Y0 253 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms