RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PIH1D3Q9NQM4 214 aaKnown RBP21.14■□□□□ 0.98
GDE1-203ENST00000564172 ANKIB1Q9P2G1 1089 aa21.14■□□□□ 0.98
GDE1-203ENST00000564172 KLRK1P26718 216 aa21.14■□□□□ 0.97
GDE1-203ENST00000564172 PDE6BP35913 854 aa21.14■□□□□ 0.97
GDE1-203ENST00000564172 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
GDE1-203ENST00000564172 IL17RAQ96F46 866 aa21.14■□□□□ 0.97
GDE1-203ENST00000564172 TMEM51Q9NW97 253 aa21.14■□□□□ 0.97
GDE1-203ENST00000564172 CCDC129Q6ZRS4 1044 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 FBXO33Q7Z6M2 555 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 GNL3LQ9NVN8 582 aaKnown RBP21.13■□□□□ 0.97
GDE1-203ENST00000564172 LEMD3Q9Y2U8 911 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 ANKRD31Q8N7Z5 1873 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 XDHP47989 1333 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 VPS37DQ86XT2 251 aa21.13■□□□□ 0.97
GDE1-203ENST00000564172 NPR1P16066 1061 aa21.12■□□□□ 0.97
GDE1-203ENST00000564172 BRD2P25440 801 aaKnown RBP21.12■□□□□ 0.97
GDE1-203ENST00000564172 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.12■□□□□ 0.97
GDE1-203ENST00000564172 IQSEC3Q9UPP2 1182 aaPredicted RBP21.12■□□□□ 0.97
GDE1-203ENST00000564172 NECTIN1Q15223 517 aa21.12■□□□□ 0.97
GDE1-203ENST00000564172 OSBP2Q969R2 916 aa21.12■□□□□ 0.97
GDE1-203ENST00000564172 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
GDE1-203ENST00000564172 ZSCAN25Q6NSZ9 544 aa21.11■□□□□ 0.97
GDE1-203ENST00000564172 RBM8AQ9Y5S9 174 aaKnown RBP21.11■□□□□ 0.97
GDE1-203ENST00000564172 IRS2Q9Y4H2 1338 aa21.11■□□□□ 0.97
GDE1-203ENST00000564172 CD2BP2O95400 341 aaKnown RBP21.1■□□□□ 0.97
GDE1-203ENST00000564172 GPSM2P81274 684 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 TXNRD3Q86VQ6 643 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 HSCBQ8IWL3 235 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 NSFL1CQ9UNZ2 370 aaKnown RBP21.1■□□□□ 0.97
GDE1-203ENST00000564172 MAST3O60307 1309 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 HIBADHP31937 336 aaKnown RBP21.1■□□□□ 0.97
GDE1-203ENST00000564172 ADD2P35612 726 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 SLC9C2Q5TAH2 1124 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 RASEFQ8IZ41 740 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 APPBP2Q92624 585 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
GDE1-203ENST00000564172 PRPF40BQ6NWY9 871 aaKnown RBP21.09■□□□□ 0.97
GDE1-203ENST00000564172 ZHX1Q9UKY1 873 aaPredicted RBP21.09■□□□□ 0.97
GDE1-203ENST00000564172 M0R2C6 588 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 OFD1O75665 1012 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 ALDH1B1P30837 517 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 KCNB2Q92953 911 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
GDE1-203ENST00000564172 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
GDE1-203ENST00000564172 UBE3CQ15386 1083 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 TAF3Q5VWG9 929 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 SLC16A10Q8TF71 515 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 DENND2AQ9ULE3 1009 aa21.08■□□□□ 0.97
GDE1-203ENST00000564172 MAP3K12Q12852 859 aa21.08■□□□□ 0.96
GDE1-203ENST00000564172 PUS7LQ9H0K6 701 aaKnown RBP21.08■□□□□ 0.96
GDE1-203ENST00000564172 SEMA3EO15041 775 aa21.07■□□□□ 0.96
GDE1-203ENST00000564172 CHRM1P11229 460 aaPredicted RBP21.07■□□□□ 0.96
GDE1-203ENST00000564172 PDE6AP16499 860 aa21.07■□□□□ 0.96
GDE1-203ENST00000564172 ATP2B4P23634 1241 aa21.07■□□□□ 0.96
GDE1-203ENST00000564172 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
GDE1-203ENST00000564172 GTPBP4Q9BZE4 634 aaKnown RBP21.07■□□□□ 0.96
GDE1-203ENST00000564172 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
GDE1-203ENST00000564172 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.06■□□□□ 0.96
GDE1-203ENST00000564172 C15orf52Q6ZUT6 534 aaKnown RBP21.06■□□□□ 0.96
GDE1-203ENST00000564172 PANK2Q9BZ23 570 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 NEK4P51957 841 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 C2CD5Q86YS7 1000 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 TEX2Q8IWB9 1127 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 DSCC1Q9BVC3 393 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 GGA1Q9UJY5 639 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 ZNF532Q9HCE3 1301 aa21.06■□□□□ 0.96
GDE1-203ENST00000564172 COL1A1P02452 1464 aaPredicted RBP21.06■□□□□ 0.96
GDE1-203ENST00000564172 TCRBV5S4A2TA0A5A2 114 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 H0YIN7 160 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 SLC27A2O14975 620 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 ZBTB22O15209 634 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 ST18O60284 1047 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 UFL1O94874 794 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 HSPD1P10809 573 aaKnown RBP21.05■□□□□ 0.96
GDE1-203ENST00000564172 ZKSCAN1P17029 563 aaPredicted RBP21.05■□□□□ 0.96
GDE1-203ENST00000564172 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
GDE1-203ENST00000564172 LRP2BPQ9P2M1 347 aa21.05■□□□□ 0.96
GDE1-203ENST00000564172 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
GDE1-203ENST00000564172 RNF20Q5VTR2 975 aa21.04■□□□□ 0.96
GDE1-203ENST00000564172 MAGEB6Q8N7X4 407 aa21.04■□□□□ 0.96
GDE1-203ENST00000564172 TRIM44Q96DX7 344 aaPredicted RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 GPR101Q96P66 508 aaPredicted RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 ABCF2Q9UG63 623 aa21.04■□□□□ 0.96
GDE1-203ENST00000564172 POLLQ9UGP5 575 aa21.04■□□□□ 0.96
GDE1-203ENST00000564172 MYO5AQ9Y4I1 1855 aaKnown RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 PDS5AQ29RF7 1337 aaKnown RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 K7ELQ4 463 aaPredicted RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 TBC1D16Q8TBP0 767 aa21.04■□□□□ 0.96
GDE1-203ENST00000564172 UPF3BQ9BZI7 483 aaKnown RBP21.04■□□□□ 0.96
GDE1-203ENST00000564172 MYH7P12883 1935 aa21.03■□□□□ 0.96
GDE1-203ENST00000564172 GPAA1O43292 621 aa21.03■□□□□ 0.96
GDE1-203ENST00000564172 COL11A2P13942 1736 aaPredicted RBP21.02■□□□□ 0.96
GDE1-203ENST00000564172 STYK1Q6J9G0 422 aa21.02■□□□□ 0.96
GDE1-203ENST00000564172 LETM1O95202 739 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms