RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 UBE2Q2LH0YL09 131 aa21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 TTLL12Q14166 644 aaPredicted RBP21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 TAF7LQ5H9L4 462 aa21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 STRIP1Q5VSL9 837 aa21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 LDHAL6AQ6ZMR3 332 aa21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 C15orf52Q6ZUT6 534 aaKnown RBP21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 ZNF296Q8WUU4 475 aaPredicted RBP21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 SCAF8Q9UPN6 1271 aaKnown RBP21.95■■□□□ 1.1
MAP1LC3B-204ENST00000563720 ANKRD44Q8N8A2 993 aa21.94■■□□□ 1.1
MAP1LC3B-204ENST00000563720 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
MAP1LC3B-204ENST00000563720 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
MAP1LC3B-204ENST00000563720 CD209Q9NNX6 404 aa21.94■■□□□ 1.1
MAP1LC3B-204ENST00000563720 CNNM1Q9NRU3 951 aa21.94■■□□□ 1.1
MAP1LC3B-204ENST00000563720 PRAMEF18Q5VWM3 479 aa21.93■■□□□ 1.1
MAP1LC3B-204ENST00000563720 ECM29Q5VYK3 1845 aa21.93■■□□□ 1.1
MAP1LC3B-204ENST00000563720 MIER1Q8N108 512 aa21.93■■□□□ 1.1
MAP1LC3B-204ENST00000563720 MYO3BQ8WXR4 1341 aa21.93■■□□□ 1.1
MAP1LC3B-204ENST00000563720 FBXW7Q969H0 707 aa21.93■■□□□ 1.1
MAP1LC3B-204ENST00000563720 TTLL5Q6EMB2 1281 aa21.92■■□□□ 1.1
MAP1LC3B-204ENST00000563720 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
MAP1LC3B-204ENST00000563720 NF2P35240 595 aa21.91■■□□□ 1.1
MAP1LC3B-204ENST00000563720 DIEXFQ68CQ4 756 aaKnown RBP21.91■■□□□ 1.1
MAP1LC3B-204ENST00000563720 GPR25O00155 361 aa21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 PLIN1O60240 522 aa21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 GTF2IP78347 998 aa21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 MKRN3Q13064 507 aaKnown RBP21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 NBPF9Q3BBW0 867 aa21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
MAP1LC3B-204ENST00000563720 ARAP2Q8WZ64 1704 aa21.89■■□□□ 1.1
MAP1LC3B-204ENST00000563720 TM4SF4P48230 202 aa21.89■■□□□ 1.09
MAP1LC3B-204ENST00000563720 OGFOD1Q8N543 542 aa21.89■■□□□ 1.09
MAP1LC3B-204ENST00000563720 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.09
MAP1LC3B-204ENST00000563720 IL1R1P14778 569 aa21.88■■□□□ 1.09
MAP1LC3B-204ENST00000563720 SREBF2Q12772 1141 aa21.88■■□□□ 1.09
MAP1LC3B-204ENST00000563720 FBXO46Q6PJ61 603 aaPredicted RBP21.88■■□□□ 1.09
MAP1LC3B-204ENST00000563720 ZNF804AQ7Z570 1209 aa21.88■■□□□ 1.09
MAP1LC3B-204ENST00000563720 RARSP54136 660 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3B-204ENST00000563720 NOM1Q5C9Z4 860 aaKnown RBP21.87■■□□□ 1.09
MAP1LC3B-204ENST00000563720 MROH5Q6ZUA9 1318 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 WNT10BO00744 389 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 MMP14P50281 582 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 UBE4AQ14139 1066 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 KIAA0825Q8IV33 1275 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 CERS5Q8N5B7 392 aa21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
MAP1LC3B-204ENST00000563720 MYH13Q9UKX3 1938 aa21.85■■□□□ 1.09
MAP1LC3B-204ENST00000563720 FKTNO75072 461 aa21.85■■□□□ 1.09
MAP1LC3B-204ENST00000563720 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
MAP1LC3B-204ENST00000563720 ARMC9Q7Z3E5 817 aa21.85■■□□□ 1.09
MAP1LC3B-204ENST00000563720 KLHDC4Q8TBB5 520 aa21.85■■□□□ 1.09
MAP1LC3B-204ENST00000563720 PRKG1Q13976 671 aa21.84■■□□□ 1.09
MAP1LC3B-204ENST00000563720 SASH1O94885 1247 aa21.83■■□□□ 1.09
MAP1LC3B-204ENST00000563720 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-204ENST00000563720 PTPN12Q05209 780 aaKnown RBP21.83■■□□□ 1.09
MAP1LC3B-204ENST00000563720 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.09
MAP1LC3B-204ENST00000563720 ZBED3Q96IU2 234 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-204ENST00000563720 GYG1P46976 350 aa21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 FKBP1AP62942 108 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 TDRD7Q8NHU6 1098 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 GCC1Q96CN9 775 aa21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 FAM84BQ96KN1 310 aaPredicted RBP21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 JAG2Q9Y219 1238 aa21.82■■□□□ 1.08
MAP1LC3B-204ENST00000563720 FAM205AQ6ZU69 1335 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 HIBADHP31937 336 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 METTL24Q5JXM2 366 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 ARHGAP45Q92619 1136 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 CFHR5Q9BXR6 569 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 R3HDMLQ9H3Y0 253 aa21.81■■□□□ 1.08
MAP1LC3B-204ENST00000563720 PDE8BO95263 885 aa21.8■■□□□ 1.08
MAP1LC3B-204ENST00000563720 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
MAP1LC3B-204ENST00000563720 ANGEL1Q9UNK9 670 aaKnown RBP21.8■■□□□ 1.08
MAP1LC3B-204ENST00000563720 ALDH1A1P00352 501 aa21.79■■□□□ 1.08
MAP1LC3B-204ENST00000563720 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
MAP1LC3B-204ENST00000563720 SPRYD7Q5W111 196 aa21.79■■□□□ 1.08
MAP1LC3B-204ENST00000563720 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-204ENST00000563720 F8W031 263 aaPredicted RBP21.78■■□□□ 1.08
MAP1LC3B-204ENST00000563720 INTS3Q68E01 1043 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-204ENST00000563720 FBXO33Q7Z6M2 555 aa21.78■■□□□ 1.08
MAP1LC3B-204ENST00000563720 MTMR14Q8NCE2 650 aa21.78■■□□□ 1.08
MAP1LC3B-204ENST00000563720 PCDHAC2Q9Y5I4 1007 aa21.78■■□□□ 1.08
MAP1LC3B-204ENST00000563720 EYA2O00167 538 aa21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 DLGAP5Q15398 846 aa21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 LDLRAD1Q5T700 205 aa21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 MEIS3Q99687 375 aa21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 TRIM17Q9Y577 477 aa21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 LRRFIP2Q9Y608 721 aaKnown RBP21.77■■□□□ 1.08
MAP1LC3B-204ENST00000563720 MANSC4A6NHS7 340 aaPredicted RBP21.76■■□□□ 1.07
MAP1LC3B-204ENST00000563720 BCAR3O75815 825 aa21.76■■□□□ 1.07
MAP1LC3B-204ENST00000563720 MFSD14BQ5SR56 506 aa21.76■■□□□ 1.07
MAP1LC3B-204ENST00000563720 ATG9AQ7Z3C6 839 aa21.76■■□□□ 1.07
MAP1LC3B-204ENST00000563720 SLC10A4Q96EP9 437 aa21.76■■□□□ 1.07
MAP1LC3B-204ENST00000563720 FGFR2P21802 821 aa21.75■■□□□ 1.07
MAP1LC3B-204ENST00000563720 INHBEP58166 350 aa21.75■■□□□ 1.07
MAP1LC3B-204ENST00000563720 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
MAP1LC3B-204ENST00000563720 FZD1Q9UP38 647 aa21.75■■□□□ 1.07
MAP1LC3B-204ENST00000563720 SPDYE2BA6NHP3 402 aa21.74■■□□□ 1.07
MAP1LC3B-204ENST00000563720 SPDYE6P0CI01 402 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms