RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 TRPM7Q96QT4 1865 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 ZNF646O15015 1829 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 A0A1B0GUL6 1792 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 FGFR2P21802 821 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 CDCA5Q96FF9 252 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
NSMCE1-204ENST00000563273 ZBTB22O15209 634 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 BCAR3O75815 825 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 GYG1P46976 350 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 HUNKP57058 714 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 MTX1Q13505 466 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 APOBEC3FQ8IUX4 373 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 MEIS3Q99687 375 aa15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-204ENST00000563273 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 DLGAP5Q15398 846 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 ATG9AQ7Z3C6 839 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 VPS37DQ86XT2 251 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 KLHDC4Q8TBB5 520 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 LPIN2Q92539 896 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-204ENST00000563273 FOXN1O15353 648 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 NOGQ13253 232 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 IFFO2Q5TF58 517 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 ZKSCAN2Q63HK3 967 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 SERPINA10Q9UK55 444 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 SUGT1Q9Y2Z0 365 aa15.24■□□□□ 0.03
NSMCE1-204ENST00000563273 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 IL15P40933 162 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 RGMBQ6NW40 437 aa15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 FRAT1Q92837 279 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
NSMCE1-204ENST00000563273 CA12O43570 354 aa15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 MYO1BO43795 1136 aa15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 SLC5A1P13866 664 aa15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 MRIQ9BWK5 157 aa15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
NSMCE1-204ENST00000563273 FAM155AB1AL88 458 aaPredicted RBP15.21■□□□□ 0.03
NSMCE1-204ENST00000563273 GNAI2P04899 355 aa15.21■□□□□ 0.03
NSMCE1-204ENST00000563273 NF2P35240 595 aa15.21■□□□□ 0.03
NSMCE1-204ENST00000563273 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
NSMCE1-204ENST00000563273 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
NSMCE1-204ENST00000563273 AOC2O75106 756 aa15.2■□□□□ 0.02
NSMCE1-204ENST00000563273 SLC10A3P09131 477 aa15.2■□□□□ 0.02
NSMCE1-204ENST00000563273 BCAMP50895 628 aa15.2■□□□□ 0.02
NSMCE1-204ENST00000563273 TTF2Q9UNY4 1162 aaKnown RBP15.2■□□□□ 0.02
NSMCE1-204ENST00000563273 PAPPA2Q9BXP8 1791 aa15.2■□□□□ 0.02
NSMCE1-204ENST00000563273 F8W031 263 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 SEMA3EO15041 775 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 SRGAP3O43295 1099 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 SIL1Q9H173 461 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 TNNQ9UQP3 1299 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
NSMCE1-204ENST00000563273 MAST3O60307 1309 aa15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 UNCXA6NJT0 531 aa15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 GRM1Q13255 1194 aa15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 TNFAIP1Q13829 316 aa15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 PA2G4Q9UQ80 394 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-204ENST00000563273 CRKP46108 304 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 MAP3K11Q16584 847 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 ARMC9Q7Z3E5 817 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 AKAP2Q9Y2D5 859 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
NSMCE1-204ENST00000563273 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 LBX1P52954 281 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 CHAF1AQ13111 956 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 SUPT20HL1Q3ZLR7 823 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms