RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 IL16Q14005 1332 aa16.96■□□□□ 0.31
SPG7-207ENST00000563218 BRCA2P51587 3418 aa16.96■□□□□ 0.31
SPG7-207ENST00000563218 KCNJ4P48050 445 aa16.96■□□□□ 0.31
SPG7-207ENST00000563218 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
SPG7-207ENST00000563218 APOBEC3FQ8IUX4 373 aaKnown RBP16.96■□□□□ 0.31
SPG7-207ENST00000563218 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
SPG7-207ENST00000563218 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
SPG7-207ENST00000563218 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
SPG7-207ENST00000563218 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
SPG7-207ENST00000563218 RBBP6Q7Z6E9 1792 aaKnown RBP16.96■□□□□ 0.31
SPG7-207ENST00000563218 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.3
SPG7-207ENST00000563218 MKI67P46013 3256 aaKnown RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 VAMP4O75379 141 aa16.95■□□□□ 0.3
SPG7-207ENST00000563218 TM4SF4P48230 202 aa16.95■□□□□ 0.3
SPG7-207ENST00000563218 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
SPG7-207ENST00000563218 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
SPG7-207ENST00000563218 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 GPR25O00155 361 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 NF2P35240 595 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 CLMNQ96JQ2 1002 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
SPG7-207ENST00000563218 CLRN2A0PK11 232 aa16.93■□□□□ 0.3
SPG7-207ENST00000563218 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
SPG7-207ENST00000563218 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
SPG7-207ENST00000563218 DLGAP5Q15398 846 aa16.92■□□□□ 0.3
SPG7-207ENST00000563218 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
SPG7-207ENST00000563218 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
SPG7-207ENST00000563218 SPRYD7Q5W111 196 aa16.92■□□□□ 0.3
SPG7-207ENST00000563218 DEFB129Q9H1M3 183 aa16.92■□□□□ 0.3
SPG7-207ENST00000563218 PLIN1O60240 522 aa16.91■□□□□ 0.3
SPG7-207ENST00000563218 IL1R1P14778 569 aa16.91■□□□□ 0.3
SPG7-207ENST00000563218 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SPG7-207ENST00000563218 LMBR1LQ6UX01 489 aa16.91■□□□□ 0.3
SPG7-207ENST00000563218 C15orf52Q6ZUT6 534 aaKnown RBP16.91■□□□□ 0.3
SPG7-207ENST00000563218 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
SPG7-207ENST00000563218 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
SPG7-207ENST00000563218 MTMR14Q8NCE2 650 aa16.9■□□□□ 0.3
SPG7-207ENST00000563218 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
SPG7-207ENST00000563218 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 IGF2BP3O00425 579 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPG7-207ENST00000563218 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 GJA5P36382 358 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 MMP14P50281 582 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 NBPF12Q5TAG4 269 aaPredicted RBP16.89■□□□□ 0.29
SPG7-207ENST00000563218 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 WNK4Q96J92 1243 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
SPG7-207ENST00000563218 FKTNO75072 461 aa16.88■□□□□ 0.29
SPG7-207ENST00000563218 MAP3K11Q16584 847 aa16.88■□□□□ 0.29
SPG7-207ENST00000563218 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
SPG7-207ENST00000563218 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
SPG7-207ENST00000563218 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
SPG7-207ENST00000563218 CFHR5Q9BXR6 569 aa16.88■□□□□ 0.29
SPG7-207ENST00000563218 E9PSI1 815 aa16.87■□□□□ 0.29
SPG7-207ENST00000563218 GRM8O00222 908 aa16.87■□□□□ 0.29
SPG7-207ENST00000563218 PKN2Q16513 984 aaKnown RBP16.87■□□□□ 0.29
SPG7-207ENST00000563218 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
SPG7-207ENST00000563218 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
SPG7-207ENST00000563218 PUS3Q9BZE2 481 aaKnown RBP16.87■□□□□ 0.29
SPG7-207ENST00000563218 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 GYG1P46976 350 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 CAP1Q01518 475 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 SUCLG2Q96I99 432 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
SPG7-207ENST00000563218 USP2O75604 605 aaPredicted RBP16.85■□□□□ 0.29
SPG7-207ENST00000563218 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
SPG7-207ENST00000563218 FKBP1AP62942 108 aaKnown RBP16.85■□□□□ 0.29
SPG7-207ENST00000563218 GRIK5Q16478 980 aa16.85■□□□□ 0.29
SPG7-207ENST00000563218 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
SPG7-207ENST00000563218 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
SPG7-207ENST00000563218 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
SPG7-207ENST00000563218 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
SPG7-207ENST00000563218 MANSC4A6NHS7 340 aaPredicted RBP16.84■□□□□ 0.29
SPG7-207ENST00000563218 RASA3Q14644 834 aa16.84■□□□□ 0.29
SPG7-207ENST00000563218 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
SPG7-207ENST00000563218 FAM205AQ6ZU69 1335 aa16.84■□□□□ 0.29
SPG7-207ENST00000563218 MYO1BO43795 1136 aa16.83■□□□□ 0.28
SPG7-207ENST00000563218 PPP1R12BO60237 982 aaPredicted RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 ZBTB48P10074 688 aaPredicted RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
SPG7-207ENST00000563218 MFSD14BQ5SR56 506 aa16.83■□□□□ 0.28
SPG7-207ENST00000563218 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
SPG7-207ENST00000563218 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
SPG7-207ENST00000563218 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 IQSEC3Q9UPP2 1182 aaPredicted RBP16.83■□□□□ 0.28
SPG7-207ENST00000563218 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms