RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
CLK3-208ENST00000562626 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
CLK3-208ENST00000562626 AAMPQ13685 434 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 AACSQ86V21 672 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 GPC2Q8N158 579 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 DNAJC5GQ8N7S2 189 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 KIF1BPQ96EK5 621 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 TRPM7Q96QT4 1865 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 GMLQ99445 158 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
CLK3-208ENST00000562626 G3V3G9 751 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 EGFRP00533 1210 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
CLK3-208ENST00000562626 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 SMC5Q8IY18 1101 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
CLK3-208ENST00000562626 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 NDUFB9Q9Y6M9 179 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
CLK3-208ENST00000562626 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 EPS15P42566 896 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 MCAMP43121 646 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
CLK3-208ENST00000562626 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 TTLL5Q6EMB2 1281 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 RSBN1LQ6PCB5 846 aaPredicted RBP12.05□□□□□ -0.48
CLK3-208ENST00000562626 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
CLK3-208ENST00000562626 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
CLK3-208ENST00000562626 KIF3CO14782 793 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
CLK3-208ENST00000562626 CAVIN4Q5BKX8 364 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 B4GALNT3Q6L9W6 998 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 GPRC5DQ9NZD1 345 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 AOX1Q06278 1338 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
CLK3-208ENST00000562626 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
CLK3-208ENST00000562626 TNIP1Q15025 636 aa12.03□□□□□ -0.48
CLK3-208ENST00000562626 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
CLK3-208ENST00000562626 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
CLK3-208ENST00000562626 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
CLK3-208ENST00000562626 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
CLK3-208ENST00000562626 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
CLK3-208ENST00000562626 MYH1P12882 1939 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 BAZ2AQ9UIF9 1905 aaKnown RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 HIRAP54198 1017 aaPredicted RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 ANKRD45Q5TZF3 282 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 TBC1D9Q6ZT07 1266 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 KIAA0825Q8IV33 1275 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 LNPKQ9C0E8 428 aa12.02□□□□□ -0.49
CLK3-208ENST00000562626 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.49
CLK3-208ENST00000562626 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
CLK3-208ENST00000562626 PDE4AP27815 886 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 PRDX5P30044 214 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 TTC39AQ5SRH9 613 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 GORABQ5T7V8 394 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 AGBL3Q8NEM8 1001 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 ZNF384Q8TF68 577 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
CLK3-208ENST00000562626 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 SIPA1L1O43166 1804 aa12.01□□□□□ -0.49
CLK3-208ENST00000562626 NAV1Q8NEY1 1877 aa12□□□□□ -0.49
CLK3-208ENST00000562626 ZBTB22O15209 634 aa12□□□□□ -0.49
CLK3-208ENST00000562626 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
CLK3-208ENST00000562626 CYP2E1P05181 493 aaPredicted RBP12□□□□□ -0.49
CLK3-208ENST00000562626 EPHX2P34913 555 aa12□□□□□ -0.49
CLK3-208ENST00000562626 ZAP70P43403 619 aa12□□□□□ -0.49
CLK3-208ENST00000562626 ZNF280AP59817 542 aaPredicted RBP12□□□□□ -0.49
CLK3-208ENST00000562626 FKBP1AP62942 108 aaKnown RBP12□□□□□ -0.49
CLK3-208ENST00000562626 NUCB1Q02818 461 aa12□□□□□ -0.49
CLK3-208ENST00000562626 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
CLK3-208ENST00000562626 DPF2Q92785 391 aa12□□□□□ -0.49
CLK3-208ENST00000562626 ZNF512BQ96KM6 892 aaPredicted RBP12□□□□□ -0.49
CLK3-208ENST00000562626 PIH1D3Q9NQM4 214 aaKnown RBP12□□□□□ -0.49
CLK3-208ENST00000562626 HACL1Q9UJ83 578 aa12□□□□□ -0.49
CLK3-208ENST00000562626 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
CLK3-208ENST00000562626 OTOFQ9HC10 1997 aa11.99□□□□□ -0.49
CLK3-208ENST00000562626 SEMA3EO15041 775 aa11.99□□□□□ -0.49
CLK3-208ENST00000562626 NEFLP07196 543 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms