RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
NSMCE1-203ENST00000562039 CLRN2A0PK11 232 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 EYA2O00167 538 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 WNT10BO00744 389 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 IL1R1P14778 569 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 BCAMP50895 628 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 RBM5P52756 815 aaKnown RBP eCLIP11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 UBE4AQ14139 1066 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 GRIK5Q16478 980 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 C15orf52Q6ZUT6 534 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 VPS37DQ86XT2 251 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 FZD1Q9UP38 647 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
NSMCE1-203ENST00000562039 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 C2orf69Q8N8R5 385 aa11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
NSMCE1-203ENST00000562039 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 CAPN15O75808 1086 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 PDE8BO95263 885 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 ECE1P42892 770 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 LBX1P52954 281 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
NSMCE1-203ENST00000562039 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 CAVIN4Q5BKX8 364 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 PRMT6Q96LA8 375 aaPredicted RBP11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 ZNF609O15014 1411 aa11.82□□□□□ -0.52
NSMCE1-203ENST00000562039 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 SLC5A1P13866 664 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 ADORA1P30542 326 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 ARHGAP45Q92619 1136 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
NSMCE1-203ENST00000562039 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 RLBP1P12271 317 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 FGFR2P21802 821 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 TDRD3Q9H7E2 651 aaKnown RBP11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
NSMCE1-203ENST00000562039 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 GNAI2P04899 355 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 GNAI3P08754 354 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 KIF23Q02241 960 aaPredicted RBP11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 MAP2K1Q02750 393 aaPredicted RBP11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 PANK1Q8TE04 598 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
NSMCE1-203ENST00000562039 FAM155AB1AL88 458 aaPredicted RBP11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 PHKA1P46020 1223 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 CRKP46108 304 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 CACNB3P54284 484 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 TIMM10P62072 90 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 TFCP2Q12800 502 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 APOBEC3FQ8IUX4 373 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 LPIN2Q92539 896 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
NSMCE1-203ENST00000562039 CIAO1O76071 339 aa11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 NEUROD6Q96NK8 337 aa11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-203ENST00000562039 ANGEL1Q9UNK9 670 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms