RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 PPP2R3BQ9Y5P8 575 aa18.47■□□□□ 0.55
SPG7-205ENST00000561945 UTYO14607 1347 aa18.47■□□□□ 0.55
SPG7-205ENST00000561945 UNCXA6NJT0 531 aa18.46■□□□□ 0.55
SPG7-205ENST00000561945 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
SPG7-205ENST00000561945 ARMC9Q7Z3E5 817 aa18.46■□□□□ 0.55
SPG7-205ENST00000561945 ZNF804AQ7Z570 1209 aa18.46■□□□□ 0.55
SPG7-205ENST00000561945 HELBQ8NG08 1087 aaPredicted RBP18.46■□□□□ 0.55
SPG7-205ENST00000561945 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
SPG7-205ENST00000561945 FAM205AQ6ZU69 1335 aa18.46■□□□□ 0.55
SPG7-205ENST00000561945 ZNF316A6NFI3 1004 aaPredicted RBP18.45■□□□□ 0.54
SPG7-205ENST00000561945 DLGAP5Q15398 846 aa18.45■□□□□ 0.54
SPG7-205ENST00000561945 CCDC57Q2TAC2 916 aa18.45■□□□□ 0.54
SPG7-205ENST00000561945 LDHAL6AQ6ZMR3 332 aa18.45■□□□□ 0.54
SPG7-205ENST00000561945 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
SPG7-205ENST00000561945 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
SPG7-205ENST00000561945 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
SPG7-205ENST00000561945 SPDYE2BA6NHP3 402 aa18.44■□□□□ 0.54
SPG7-205ENST00000561945 SPDYE6P0CI01 402 aa18.44■□□□□ 0.54
SPG7-205ENST00000561945 PKN2Q16513 984 aaKnown RBP18.44■□□□□ 0.54
SPG7-205ENST00000561945 ZNF594Q96JF6 807 aaPredicted RBP18.44■□□□□ 0.54
SPG7-205ENST00000561945 SREBF2Q12772 1141 aa18.43■□□□□ 0.54
SPG7-205ENST00000561945 TTLL12Q14166 644 aaPredicted RBP18.43■□□□□ 0.54
SPG7-205ENST00000561945 SPRYD7Q5W111 196 aa18.43■□□□□ 0.54
SPG7-205ENST00000561945 TDRD7Q8NHU6 1098 aaKnown RBP18.43■□□□□ 0.54
SPG7-205ENST00000561945 ZNF296Q8WUU4 475 aaPredicted RBP18.43■□□□□ 0.54
SPG7-205ENST00000561945 SRCIN1Q9C0H9 1055 aa18.43■□□□□ 0.54
SPG7-205ENST00000561945 UBE4AQ14139 1066 aa18.42■□□□□ 0.54
SPG7-205ENST00000561945 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
SPG7-205ENST00000561945 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
SPG7-205ENST00000561945 PRMT6Q96LA8 375 aaPredicted RBP18.42■□□□□ 0.54
SPG7-205ENST00000561945 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
SPG7-205ENST00000561945 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
SPG7-205ENST00000561945 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
SPG7-205ENST00000561945 HTTP42858 3142 aa18.41■□□□□ 0.54
SPG7-205ENST00000561945 TBC1D8O95759 1140 aa18.41■□□□□ 0.54
SPG7-205ENST00000561945 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
SPG7-205ENST00000561945 INHBEP58166 350 aa18.41■□□□□ 0.54
SPG7-205ENST00000561945 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
SPG7-205ENST00000561945 ANGEL1Q9UNK9 670 aaKnown RBP18.41■□□□□ 0.54
SPG7-205ENST00000561945 OTOFQ9HC10 1997 aa18.41■□□□□ 0.54
SPG7-205ENST00000561945 GPR25O00155 361 aa18.4■□□□□ 0.54
SPG7-205ENST00000561945 MYO1BO43795 1136 aa18.4■□□□□ 0.54
SPG7-205ENST00000561945 NBPF7P0C2Y1 421 aaPredicted RBP18.4■□□□□ 0.54
SPG7-205ENST00000561945 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
SPG7-205ENST00000561945 FAM84BQ96KN1 310 aaPredicted RBP18.4■□□□□ 0.54
SPG7-205ENST00000561945 RIPOR2Q9Y4F9 1068 aa18.4■□□□□ 0.54
SPG7-205ENST00000561945 SLC34A2O95436 690 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 ALDH1A1P00352 501 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 SUPT20HL1Q3ZLR7 823 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 HPS5Q9UPZ3 1129 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 AOX1Q06278 1338 aa18.39■□□□□ 0.53
SPG7-205ENST00000561945 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
SPG7-205ENST00000561945 PPP1R12BO60237 982 aaPredicted RBP18.38■□□□□ 0.53
SPG7-205ENST00000561945 PRKG1Q13976 671 aa18.38■□□□□ 0.53
SPG7-205ENST00000561945 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
SPG7-205ENST00000561945 MRPL50Q8N5N7 158 aaKnown RBP18.38■□□□□ 0.53
SPG7-205ENST00000561945 PUS3Q9BZE2 481 aaKnown RBP18.38■□□□□ 0.53
SPG7-205ENST00000561945 FZD1Q9UP38 647 aa18.38■□□□□ 0.53
SPG7-205ENST00000561945 CENPFP49454 3210 aa18.38■□□□□ 0.53
SPG7-205ENST00000561945 MROH5Q6ZUA9 1318 aa18.38■□□□□ 0.53
SPG7-205ENST00000561945 MKI67P46013 3256 aaKnown RBP18.38■□□□□ 0.53
SPG7-205ENST00000561945 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
SPG7-205ENST00000561945 HIBADHP31937 336 aaKnown RBP18.37■□□□□ 0.53
SPG7-205ENST00000561945 SPDYE2Q495Y8 402 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 SLC4A10Q6U841 1118 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 PTPRCP08575 1304 aa18.37■□□□□ 0.53
SPG7-205ENST00000561945 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 PLIN1O60240 522 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 USP2O75604 605 aaPredicted RBP18.36■□□□□ 0.53
SPG7-205ENST00000561945 GYG1P46976 350 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
SPG7-205ENST00000561945 NBPF12Q5TAG4 269 aaPredicted RBP18.36■□□□□ 0.53
SPG7-205ENST00000561945 FBXO33Q7Z6M2 555 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 SLC10A4Q96EP9 437 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 CLMNQ96JQ2 1002 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 R3HDMLQ9H3Y0 253 aa18.36■□□□□ 0.53
SPG7-205ENST00000561945 BRCA2P51587 3418 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
SPG7-205ENST00000561945 FKTNO75072 461 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 TNFAIP1Q13829 316 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 RASA3Q14644 834 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
SPG7-205ENST00000561945 IFNL1Q8IU54 200 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 TEPSINQ96N21 525 aa18.35■□□□□ 0.53
SPG7-205ENST00000561945 BICC1Q9H694 974 aaKnown RBP18.35■□□□□ 0.53
SPG7-205ENST00000561945 SOX10P56693 466 aa18.34■□□□□ 0.53
SPG7-205ENST00000561945 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
SPG7-205ENST00000561945 ANKRD13AQ8IZ07 590 aa18.34■□□□□ 0.53
SPG7-205ENST00000561945 MRIQ9BWK5 157 aa18.34■□□□□ 0.53
SPG7-205ENST00000561945 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
SPG7-205ENST00000561945 TTF2Q9UNY4 1162 aaKnown RBP18.34■□□□□ 0.53
SPG7-205ENST00000561945 JAG2Q9Y219 1238 aa18.34■□□□□ 0.53
SPG7-205ENST00000561945 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms