RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
USB1-205ENST00000561743 GYG1P46976 350 aa16.97■□□□□ 0.31
USB1-205ENST00000561743 FKBP1AP62942 108 aaKnown RBP16.97■□□□□ 0.31
USB1-205ENST00000561743 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
USB1-205ENST00000561743 PRAMEF18Q5VWM3 479 aa16.97■□□□□ 0.31
USB1-205ENST00000561743 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
USB1-205ENST00000561743 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
USB1-205ENST00000561743 JAG2Q9Y219 1238 aa16.97■□□□□ 0.31
USB1-205ENST00000561743 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
USB1-205ENST00000561743 FKBP1BP68106 108 aa16.96■□□□□ 0.31
USB1-205ENST00000561743 VGLL2Q8N8G2 317 aa16.96■□□□□ 0.31
USB1-205ENST00000561743 TDRD7Q8NHU6 1098 aaKnown RBP16.96■□□□□ 0.31
USB1-205ENST00000561743 CCDC102AQ96A19 550 aa16.96■□□□□ 0.31
USB1-205ENST00000561743 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
USB1-205ENST00000561743 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
USB1-205ENST00000561743 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.3
USB1-205ENST00000561743 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
USB1-205ENST00000561743 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
USB1-205ENST00000561743 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
USB1-205ENST00000561743 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
USB1-205ENST00000561743 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
USB1-205ENST00000561743 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
USB1-205ENST00000561743 CASP8AP2Q9UKL3 1982 aa16.95■□□□□ 0.3
USB1-205ENST00000561743 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
USB1-205ENST00000561743 CA12O43570 354 aa16.94■□□□□ 0.3
USB1-205ENST00000561743 CAPN15O75808 1086 aa16.94■□□□□ 0.3
USB1-205ENST00000561743 SLC10A3P09131 477 aa16.94■□□□□ 0.3
USB1-205ENST00000561743 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
USB1-205ENST00000561743 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
USB1-205ENST00000561743 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
USB1-205ENST00000561743 APOBEC3FQ8IUX4 373 aaKnown RBP16.94■□□□□ 0.3
USB1-205ENST00000561743 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
USB1-205ENST00000561743 PDE8BO95263 885 aa16.93■□□□□ 0.3
USB1-205ENST00000561743 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
USB1-205ENST00000561743 SPDYE2BA6NHP3 402 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
USB1-205ENST00000561743 SPDYE6P0CI01 402 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
USB1-205ENST00000561743 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 MFSD14BQ5SR56 506 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 MIER1Q8N108 512 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 AOX1Q06278 1338 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 KIF16BQ96L93 1317 aa16.92■□□□□ 0.3
USB1-205ENST00000561743 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
USB1-205ENST00000561743 NF2P35240 595 aa16.91■□□□□ 0.3
USB1-205ENST00000561743 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
USB1-205ENST00000561743 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
USB1-205ENST00000561743 PRMT6Q96LA8 375 aaPredicted RBP16.91■□□□□ 0.3
USB1-205ENST00000561743 LAMB1P07942 1786 aa16.91■□□□□ 0.3
USB1-205ENST00000561743 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 EYA2O00167 538 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 FGFR2P21802 821 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 CAVIN4Q5BKX8 364 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
USB1-205ENST00000561743 VPS37DQ86XT2 251 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
USB1-205ENST00000561743 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
USB1-205ENST00000561743 OTOFQ9HC10 1997 aa16.89■□□□□ 0.3
USB1-205ENST00000561743 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
USB1-205ENST00000561743 MYO1BO43795 1136 aa16.89■□□□□ 0.29
USB1-205ENST00000561743 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
USB1-205ENST00000561743 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.29
USB1-205ENST00000561743 ATG9AQ7Z3C6 839 aa16.89■□□□□ 0.29
USB1-205ENST00000561743 MEIS3Q99687 375 aa16.89■□□□□ 0.29
USB1-205ENST00000561743 TTF2Q9UNY4 1162 aaKnown RBP16.89■□□□□ 0.29
USB1-205ENST00000561743 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
USB1-205ENST00000561743 BCAMP50895 628 aa16.88■□□□□ 0.29
USB1-205ENST00000561743 RBM5P52756 815 aaKnown RBP eCLIP16.88■□□□□ 0.29
USB1-205ENST00000561743 GRIK5Q16478 980 aa16.88■□□□□ 0.29
USB1-205ENST00000561743 INTS3Q68E01 1043 aaKnown RBP16.88■□□□□ 0.29
USB1-205ENST00000561743 CSRNP1Q96S65 589 aa16.88■□□□□ 0.29
USB1-205ENST00000561743 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
USB1-205ENST00000561743 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
USB1-205ENST00000561743 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
USB1-205ENST00000561743 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
USB1-205ENST00000561743 PRKG1Q13976 671 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 SIL1Q9H173 461 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 VEZTQ9HBM0 779 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 SAGE1Q9NXZ1 904 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
USB1-205ENST00000561743 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
USB1-205ENST00000561743 BCAR3O75815 825 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 CIAO1O76071 339 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 TRIM27P14373 513 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
USB1-205ENST00000561743 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 ARMC9Q7Z3E5 817 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 LPIN2Q92539 896 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 RNF186Q9NXI6 227 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
USB1-205ENST00000561743 TRPA1O75762 1119 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 SLC5A1P13866 664 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 CRKP46108 304 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
USB1-205ENST00000561743 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
USB1-205ENST00000561743 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 ANGEL1Q9UNK9 670 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms