RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
USB1-204ENST00000561568 GMPSP49915 693 aaPredicted RBP20.07■□□□□ 0.8
USB1-204ENST00000561568 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
USB1-204ENST00000561568 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
USB1-204ENST00000561568 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
USB1-204ENST00000561568 HACL1Q9UJ83 578 aa20.07■□□□□ 0.8
USB1-204ENST00000561568 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
USB1-204ENST00000561568 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
USB1-204ENST00000561568 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
USB1-204ENST00000561568 H7C1D1 291 aa20.06■□□□□ 0.8
USB1-204ENST00000561568 ZNF609O15014 1411 aa20.06■□□□□ 0.8
USB1-204ENST00000561568 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
USB1-204ENST00000561568 WDR66Q8TBY9 1149 aa20.06■□□□□ 0.8
USB1-204ENST00000561568 GPRC5DQ9NZD1 345 aa20.06■□□□□ 0.8
USB1-204ENST00000561568 CNOT7Q9UIV1 285 aaKnown RBP20.06■□□□□ 0.8
USB1-204ENST00000561568 DBNLQ9UJU6 430 aaKnown RBP20.06■□□□□ 0.8
USB1-204ENST00000561568 POTECB2RU33 542 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 SCNN1DP51172 638 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 TTC39AQ5SRH9 613 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 ANKRD45Q5TZF3 282 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 OGFOD1Q8N543 542 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 GMLQ99445 158 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
USB1-204ENST00000561568 SMARCA5O60264 1052 aaPredicted RBP20.04■□□□□ 0.8
USB1-204ENST00000561568 USP17L8P0C7I0 530 aa20.04■□□□□ 0.8
USB1-204ENST00000561568 ARID4AP29374 1257 aaPredicted RBP20.04■□□□□ 0.8
USB1-204ENST00000561568 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
USB1-204ENST00000561568 MFSD14BQ5SR56 506 aa20.04■□□□□ 0.8
USB1-204ENST00000561568 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
USB1-204ENST00000561568 NMRK2Q9NPI5 230 aa20.04■□□□□ 0.8
USB1-204ENST00000561568 PNMA8AQ86V59 439 aaPredicted RBP20.03■□□□□ 0.8
USB1-204ENST00000561568 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
USB1-204ENST00000561568 SUGT1Q9Y2Z0 365 aa20.03■□□□□ 0.8
USB1-204ENST00000561568 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.8
USB1-204ENST00000561568 EPHX2P34913 555 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 EPS15P42566 896 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 MICALL2Q8IY33 904 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
USB1-204ENST00000561568 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 TAF1DQ9H5J8 278 aaPredicted RBP20.02■□□□□ 0.8
USB1-204ENST00000561568 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
USB1-204ENST00000561568 TLR7Q9NYK1 1049 aaKnown RBP20.02■□□□□ 0.8
USB1-204ENST00000561568 JAG2Q9Y219 1238 aa20.02■□□□□ 0.8
USB1-204ENST00000561568 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
USB1-204ENST00000561568 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
USB1-204ENST00000561568 CERS5Q8N5B7 392 aa20.01■□□□□ 0.79
USB1-204ENST00000561568 HMG20BQ9P0W2 317 aa20.01■□□□□ 0.79
USB1-204ENST00000561568 WDR90Q96KV7 1748 aa20■□□□□ 0.79
USB1-204ENST00000561568 ZNF280AP59817 542 aaPredicted RBP20■□□□□ 0.79
USB1-204ENST00000561568 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
USB1-204ENST00000561568 KIAA0825Q8IV33 1275 aa20■□□□□ 0.79
USB1-204ENST00000561568 C16orf71Q8IYS4 520 aaPredicted RBP20■□□□□ 0.79
USB1-204ENST00000561568 GPATCH3Q96I76 525 aa20■□□□□ 0.79
USB1-204ENST00000561568 MRIQ9BWK5 157 aa20■□□□□ 0.79
USB1-204ENST00000561568 SALL1Q9NSC2 1324 aa20■□□□□ 0.79
USB1-204ENST00000561568 MCAMP43121 646 aa19.99■□□□□ 0.79
USB1-204ENST00000561568 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
USB1-204ENST00000561568 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
USB1-204ENST00000561568 KIF3CO14782 793 aa19.98■□□□□ 0.79
USB1-204ENST00000561568 IGSF3O75054 1194 aa19.98■□□□□ 0.79
USB1-204ENST00000561568 ATP5JP18859 108 aa19.98■□□□□ 0.79
USB1-204ENST00000561568 NUCB1Q02818 461 aa19.98■□□□□ 0.79
USB1-204ENST00000561568 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
USB1-204ENST00000561568 ARAP2Q8WZ64 1704 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 F8W031 263 aaPredicted RBP19.97■□□□□ 0.79
USB1-204ENST00000561568 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
USB1-204ENST00000561568 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
USB1-204ENST00000561568 SCARF1Q14162 830 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 CHD1LQ86WJ1 897 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 TTF2Q9UNY4 1162 aaKnown RBP19.97■□□□□ 0.79
USB1-204ENST00000561568 SCN4AP35499 1836 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 PSME4Q14997 1843 aa19.97■□□□□ 0.79
USB1-204ENST00000561568 RBM26Q5T8P6 1007 aaKnown RBP19.96■□□□□ 0.79
USB1-204ENST00000561568 SAMD7Q7Z3H4 446 aa19.96■□□□□ 0.79
USB1-204ENST00000561568 SNRKQ9NRH2 765 aa19.96■□□□□ 0.79
USB1-204ENST00000561568 ABCF2Q9UG63 623 aa19.96■□□□□ 0.79
USB1-204ENST00000561568 MAST3O60307 1309 aa19.96■□□□□ 0.79
USB1-204ENST00000561568 SHTN1A0MZ66 631 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 TOMM70O94826 608 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 TBC1D10BQ4KMP7 808 aaPredicted RBP19.95■□□□□ 0.78
USB1-204ENST00000561568 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
USB1-204ENST00000561568 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 ZC3H15Q8WU90 426 aaKnown RBP19.95■□□□□ 0.78
USB1-204ENST00000561568 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 SERPINA10Q9UK55 444 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 TTC41PQ6P2S7 1318 aa19.95■□□□□ 0.78
USB1-204ENST00000561568 ERC2O15083 957 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
USB1-204ENST00000561568 ZAP70P43403 619 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 TTF1Q15361 905 aaPredicted RBP19.94■□□□□ 0.78
USB1-204ENST00000561568 DLGAP5Q15398 846 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 KIF4BQ2VIQ3 1234 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 PI16Q6UXB8 463 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 SLF2Q8IX21 1173 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 MTMR14Q8NCE2 650 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 LNPKQ9C0E8 428 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms