RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 KIAA0825Q8IV33 1275 aa25.82■■□□□ 1.72
TPM1-232ENST00000561425 MTMR14Q8NCE2 650 aa25.82■■□□□ 1.72
TPM1-232ENST00000561425 COPRSQ9NQ92 184 aa25.82■■□□□ 1.72
TPM1-232ENST00000561425 SULF1Q8IWU6 871 aa25.81■■□□□ 1.72
TPM1-232ENST00000561425 HDAC9Q9UKV0 1011 aa25.8■■□□□ 1.72
TPM1-232ENST00000561425 WDR33Q9C0J8 1336 aaKnown RBP25.8■■□□□ 1.72
TPM1-232ENST00000561425 PUM3Q15397 648 aaKnown RBP25.79■■□□□ 1.72
TPM1-232ENST00000561425 CLUAP1Q96AJ1 413 aa25.79■■□□□ 1.72
TPM1-232ENST00000561425 POLR2AP24928 1970 aaKnown RBP25.78■■□□□ 1.72
TPM1-232ENST00000561425 TMEM57Q8N5G2 664 aa25.78■■□□□ 1.72
TPM1-232ENST00000561425 HSPA1AP0DMV8 641 aaKnown RBP25.77■■□□□ 1.72
TPM1-232ENST00000561425 HSPA1BP0DMV9 641 aaKnown RBP25.77■■□□□ 1.72
TPM1-232ENST00000561425 CAVIN4Q5BKX8 364 aa25.77■■□□□ 1.72
TPM1-232ENST00000561425 LPIN2Q92539 896 aa25.77■■□□□ 1.72
TPM1-232ENST00000561425 CAPNS2Q96L46 248 aa25.77■■□□□ 1.72
TPM1-232ENST00000561425 IL15P40933 162 aaPredicted RBP25.76■■□□□ 1.71
TPM1-232ENST00000561425 ECE1P42892 770 aa25.76■■□□□ 1.71
TPM1-232ENST00000561425 CDCA5Q96FF9 252 aa25.76■■□□□ 1.71
TPM1-232ENST00000561425 ZNF408Q9H9D4 720 aa25.76■■□□□ 1.71
TPM1-232ENST00000561425 ZBTB22O15209 634 aa25.75■■□□□ 1.71
TPM1-232ENST00000561425 GNAI2P04899 355 aa25.75■■□□□ 1.71
TPM1-232ENST00000561425 IFIT1P09914 478 aaKnown RBP25.75■■□□□ 1.71
TPM1-232ENST00000561425 BCAMP50895 628 aa25.75■■□□□ 1.71
TPM1-232ENST00000561425 GBA2Q9HCG7 927 aaPredicted RBP25.75■■□□□ 1.71
TPM1-232ENST00000561425 WBP1LQ9NX94 342 aa25.75■■□□□ 1.71
TPM1-232ENST00000561425 PA2G4Q9UQ80 394 aaKnown RBP25.75■■□□□ 1.71
TPM1-232ENST00000561425 MFSD14BQ5SR56 506 aa25.74■■□□□ 1.71
TPM1-232ENST00000561425 CYP4F22Q6NT55 531 aa25.74■■□□□ 1.71
TPM1-232ENST00000561425 CEP126Q9P2H0 1117 aa25.74■■□□□ 1.71
TPM1-232ENST00000561425 JAG2Q9Y219 1238 aa25.74■■□□□ 1.71
TPM1-232ENST00000561425 PCNTO95613 3336 aa25.74■■□□□ 1.71
TPM1-232ENST00000561425 RLBP1P12271 317 aa25.73■■□□□ 1.71
TPM1-232ENST00000561425 DLGAP5Q15398 846 aa25.73■■□□□ 1.71
TPM1-232ENST00000561425 DZIP1LQ8IYY4 767 aaKnown RBP25.73■■□□□ 1.71
TPM1-232ENST00000561425 SIL1Q9H173 461 aa25.73■■□□□ 1.71
TPM1-232ENST00000561425 ZBTB7BO15156 539 aaPredicted RBP25.72■■□□□ 1.71
TPM1-232ENST00000561425 SRGAP3O43295 1099 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 SLC5A1P13866 664 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 MAP2K2P36507 400 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 VPS37DQ86XT2 251 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 C2orf69Q8N8R5 385 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 PCDHAC2Q9Y5I4 1007 aa25.72■■□□□ 1.71
TPM1-232ENST00000561425 THSD7BQ9C0I4 1608 aa25.71■■□□□ 1.71
TPM1-232ENST00000561425 SPDYE2BA6NHP3 402 aa25.71■■□□□ 1.71
TPM1-232ENST00000561425 SPDYE6P0CI01 402 aa25.71■■□□□ 1.71
TPM1-232ENST00000561425 CFAP100Q494V2 611 aa25.71■■□□□ 1.71
TPM1-232ENST00000561425 PRMT6Q96LA8 375 aaPredicted RBP25.71■■□□□ 1.71
TPM1-232ENST00000561425 F8W031 263 aaPredicted RBP25.7■■□□□ 1.7
TPM1-232ENST00000561425 HUNKP57058 714 aa25.7■■□□□ 1.7
TPM1-232ENST00000561425 FKBP1BP68106 108 aa25.7■■□□□ 1.7
TPM1-232ENST00000561425 APOBEC3FQ8IUX4 373 aaKnown RBP25.7■■□□□ 1.7
TPM1-232ENST00000561425 TBC1D22AQ8WUA7 517 aa25.7■■□□□ 1.7
TPM1-232ENST00000561425 MRIQ9BWK5 157 aa25.7■■□□□ 1.7
TPM1-232ENST00000561425 SERPINA10Q9UK55 444 aa25.7■■□□□ 1.7
TPM1-232ENST00000561425 SCAF8Q9UPN6 1271 aaKnown RBP25.7■■□□□ 1.7
TPM1-232ENST00000561425 IQSEC3Q9UPP2 1182 aaPredicted RBP25.7■■□□□ 1.7
TPM1-232ENST00000561425 MAP2K1Q02750 393 aaPredicted RBP25.69■■□□□ 1.7
TPM1-232ENST00000561425 GRIK5Q16478 980 aa25.69■■□□□ 1.7
TPM1-232ENST00000561425 ATP2B3Q16720 1220 aa25.69■■□□□ 1.7
TPM1-232ENST00000561425 PNMA6EA0A0J9YXQ4 647 aa25.68■■□□□ 1.7
TPM1-232ENST00000561425 HDLBPQ00341 1268 aaKnown RBP25.68■■□□□ 1.7
TPM1-232ENST00000561425 TTF2Q9UNY4 1162 aaKnown RBP25.68■■□□□ 1.7
TPM1-232ENST00000561425 SUGT1Q9Y2Z0 365 aa25.68■■□□□ 1.7
TPM1-232ENST00000561425 FAM155AB1AL88 458 aaPredicted RBP25.67■■□□□ 1.7
TPM1-232ENST00000561425 POLA2Q14181 598 aa25.67■■□□□ 1.7
TPM1-232ENST00000561425 RGMBQ6NW40 437 aa25.67■■□□□ 1.7
TPM1-232ENST00000561425 FTSJ3Q8IY81 847 aaKnown RBP25.67■■□□□ 1.7
TPM1-232ENST00000561425 AOX1Q06278 1338 aa25.66■■□□□ 1.7
TPM1-232ENST00000561425 FOXN1O15353 648 aa25.66■■□□□ 1.7
TPM1-232ENST00000561425 ATP8B2P98198 1209 aa25.66■■□□□ 1.7
TPM1-232ENST00000561425 PRAMEF18Q5VWM3 479 aa25.66■■□□□ 1.7
TPM1-232ENST00000561425 PAXIP1Q6ZW49 1069 aaPredicted RBP25.66■■□□□ 1.7
TPM1-232ENST00000561425 AOC2O75106 756 aa25.65■■□□□ 1.7
TPM1-232ENST00000561425 SSH3Q8TE77 659 aa25.65■■□□□ 1.7
TPM1-232ENST00000561425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.65■■□□□ 1.7
TPM1-232ENST00000561425 COL1A1P02452 1464 aaPredicted RBP25.65■■□□□ 1.7
TPM1-232ENST00000561425 FRAT2O75474 233 aaPredicted RBP25.64■■□□□ 1.7
TPM1-232ENST00000561425 CHAF1AQ13111 956 aaPredicted RBP25.64■■□□□ 1.7
TPM1-232ENST00000561425 CCDC102AQ96A19 550 aa25.64■■□□□ 1.7
TPM1-232ENST00000561425 DEFB129Q9H1M3 183 aa25.64■■□□□ 1.7
TPM1-232ENST00000561425 PPP2R3BQ9Y5P8 575 aa25.64■■□□□ 1.7
TPM1-232ENST00000561425 MYO1BO43795 1136 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 CRKP46108 304 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 TIMM10P62072 90 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 TFCP2Q12800 502 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 NOGQ13253 232 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 COL13A1Q5TAT6 717 aaPredicted RBP25.63■■□□□ 1.69
TPM1-232ENST00000561425 WDR66Q8TBY9 1149 aa25.63■■□□□ 1.69
TPM1-232ENST00000561425 SEMA3EO15041 775 aa25.62■■□□□ 1.69
TPM1-232ENST00000561425 SPDYE2Q495Y8 402 aa25.62■■□□□ 1.69
TPM1-232ENST00000561425 ITPRIPQ8IWB1 547 aa25.62■■□□□ 1.69
TPM1-232ENST00000561425 AKAP2Q9Y2D5 859 aa25.62■■□□□ 1.69
TPM1-232ENST00000561425 ARAP2Q8WZ64 1704 aa25.62■■□□□ 1.69
TPM1-232ENST00000561425 PAPPA2Q9BXP8 1791 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 ADORA1P30542 326 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 PHKA1P46020 1223 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 GRM1Q13255 1194 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 CCDC102BQ68D86 513 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 PANK1Q8TE04 598 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 ZIC5Q96T25 663 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms