RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.21■■■■□ 3.07
SNRPA1-215ENST00000561187 APOBEC3FQ8IUX4 373 aaKnown RBP34.2■■■■□ 3.07
SNRPA1-215ENST00000561187 FZD1Q9UP38 647 aa34.2■■■■□ 3.07
SNRPA1-215ENST00000561187 NBPF7P0C2Y1 421 aaPredicted RBP34.19■■■■□ 3.06
SNRPA1-215ENST00000561187 DLGAP5Q15398 846 aa34.19■■■■□ 3.06
SNRPA1-215ENST00000561187 C15orf52Q6ZUT6 534 aaKnown RBP34.19■■■■□ 3.06
SNRPA1-215ENST00000561187 PUS3Q9BZE2 481 aaKnown RBP34.19■■■■□ 3.06
SNRPA1-215ENST00000561187 ZBED3Q96IU2 234 aaPredicted RBP34.18■■■■□ 3.06
SNRPA1-215ENST00000561187 IL1R1P14778 569 aa34.17■■■■□ 3.06
SNRPA1-215ENST00000561187 MRPL50Q8N5N7 158 aaKnown RBP34.17■■■■□ 3.06
SNRPA1-215ENST00000561187 KAZALD1Q96I82 304 aa34.17■■■■□ 3.06
SNRPA1-215ENST00000561187 CLRN2A0PK11 232 aa34.16■■■■□ 3.06
SNRPA1-215ENST00000561187 AOX1Q06278 1338 aa34.15■■■■□ 3.06
SNRPA1-215ENST00000561187 CFAP100Q494V2 611 aa34.15■■■■□ 3.06
SNRPA1-215ENST00000561187 BICC1Q9H694 974 aaKnown RBP34.15■■■■□ 3.06
SNRPA1-215ENST00000561187 GYG1P46976 350 aa34.14■■■■□ 3.06
SNRPA1-215ENST00000561187 VEZTQ9HBM0 779 aa34.13■■■■□ 3.05
SNRPA1-215ENST00000561187 ANGEL1Q9UNK9 670 aaKnown RBP34.13■■■■□ 3.05
SNRPA1-215ENST00000561187 MMP14P50281 582 aa34.12■■■■□ 3.05
SNRPA1-215ENST00000561187 RBM5P52756 815 aaKnown RBP eCLIP34.12■■■■□ 3.05
SNRPA1-215ENST00000561187 PTPN12Q05209 780 aaKnown RBP34.12■■■■□ 3.05
SNRPA1-215ENST00000561187 ARMC9Q7Z3E5 817 aa34.12■■■■□ 3.05
SNRPA1-215ENST00000561187 DEFB129Q9H1M3 183 aa34.12■■■■□ 3.05
SNRPA1-215ENST00000561187 ECM29Q5VYK3 1845 aa34.11■■■■□ 3.05
SNRPA1-215ENST00000561187 SSH1Q8WYL5 1049 aa34.1■■■■□ 3.05
SNRPA1-215ENST00000561187 E9PSI1 815 aa34.09■■■■□ 3.05
SNRPA1-215ENST00000561187 SSC5DA1L4H1 1573 aa34.09■■■■□ 3.05
SNRPA1-215ENST00000561187 SPDYE2BA6NHP3 402 aa34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 TBC1D8O95759 1140 aa34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 SPDYE6P0CI01 402 aa34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 LRRC24Q50LG9 513 aa34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 ANKRD44Q8N8A2 993 aa34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 PRMT6Q96LA8 375 aaPredicted RBP34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 IQSEC3Q9UPP2 1182 aaPredicted RBP34.08■■■■□ 3.05
SNRPA1-215ENST00000561187 COL1A1P02452 1464 aaPredicted RBP34.07■■■■□ 3.05
SNRPA1-215ENST00000561187 UTYO14607 1347 aa34.07■■■■□ 3.05
SNRPA1-215ENST00000561187 MYO1BO43795 1136 aa34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 UBE4AQ14139 1066 aa34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 MFSD14BQ5SR56 506 aa34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 REM2Q8IYK8 340 aaPredicted RBP34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 MTMR14Q8NCE2 650 aa34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 KLHDC4Q8TBB5 520 aa34.07■■■■□ 3.04
SNRPA1-215ENST00000561187 HIBADHP31937 336 aaKnown RBP34.06■■■■□ 3.04
SNRPA1-215ENST00000561187 CDCA7LQ96GN5 454 aa34.06■■■■□ 3.04
SNRPA1-215ENST00000561187 PTPRCP08575 1304 aa34.05■■■■□ 3.04
SNRPA1-215ENST00000561187 FKBP1AP62942 108 aaKnown RBP34.05■■■■□ 3.04
SNRPA1-215ENST00000561187 FAM84BQ96KN1 310 aaPredicted RBP34.05■■■■□ 3.04
SNRPA1-215ENST00000561187 RIPOR2Q9Y4F9 1068 aa34.05■■■■□ 3.04
SNRPA1-215ENST00000561187 METTL24Q5JXM2 366 aa34.04■■■■□ 3.04
SNRPA1-215ENST00000561187 TDRD7Q8NHU6 1098 aaKnown RBP34.04■■■■□ 3.04
SNRPA1-215ENST00000561187 TTF2Q9UNY4 1162 aaKnown RBP34.04■■■■□ 3.04
SNRPA1-215ENST00000561187 FAM205AQ6ZU69 1335 aa34.04■■■■□ 3.04
SNRPA1-215ENST00000561187 MROH5Q6ZUA9 1318 aa34.04■■■■□ 3.04
SNRPA1-215ENST00000561187 SLFN5Q08AF3 891 aa34.03■■■■□ 3.04
SNRPA1-215ENST00000561187 CHAF1AQ13111 956 aaPredicted RBP34.03■■■■□ 3.04
SNRPA1-215ENST00000561187 RABL6Q3YEC7 729 aaPredicted RBP34.03■■■■□ 3.04
SNRPA1-215ENST00000561187 ARAP2Q8WZ64 1704 aa34.03■■■■□ 3.04
SNRPA1-215ENST00000561187 VPS37DQ86XT2 251 aa34.02■■■■□ 3.04
SNRPA1-215ENST00000561187 CLMNQ96JQ2 1002 aa34.02■■■■□ 3.04
SNRPA1-215ENST00000561187 MLLT1Q03111 559 aaPredicted RBP34.01■■■■□ 3.03
SNRPA1-215ENST00000561187 LDLRAD1Q5T700 205 aa34.01■■■■□ 3.03
SNRPA1-215ENST00000561187 NBPF12Q5TAG4 269 aaPredicted RBP34.01■■■■□ 3.03
SNRPA1-215ENST00000561187 SPRYD7Q5W111 196 aa34■■■■□ 3.03
SNRPA1-215ENST00000561187 CTU1Q7Z7A3 348 aaKnown RBP34■■■■□ 3.03
SNRPA1-215ENST00000561187 SMC4Q9NTJ3 1288 aa34■■■■□ 3.03
SNRPA1-215ENST00000561187 SREBF2Q12772 1141 aa33.99■■■■□ 3.03
SNRPA1-215ENST00000561187 GRIK5Q16478 980 aa33.99■■■■□ 3.03
SNRPA1-215ENST00000561187 ZNF296Q8WUU4 475 aaPredicted RBP33.99■■■■□ 3.03
SNRPA1-215ENST00000561187 TDRD3Q9H7E2 651 aaKnown RBP33.99■■■■□ 3.03
SNRPA1-215ENST00000561187 PPP2R3BQ9Y5P8 575 aa33.99■■■■□ 3.03
SNRPA1-215ENST00000561187 RASA3Q14644 834 aa33.98■■■■□ 3.03
SNRPA1-215ENST00000561187 USP44Q9H0E7 712 aa33.98■■■■□ 3.03
SNRPA1-215ENST00000561187 PPP1R12BO60237 982 aaPredicted RBP33.97■■■■□ 3.03
SNRPA1-215ENST00000561187 FRAT2O75474 233 aaPredicted RBP33.97■■■■□ 3.03
SNRPA1-215ENST00000561187 TM4SF4P48230 202 aa33.97■■■■□ 3.03
SNRPA1-215ENST00000561187 SOX10P56693 466 aa33.97■■■■□ 3.03
SNRPA1-215ENST00000561187 SLC10A4Q96EP9 437 aa33.97■■■■□ 3.03
SNRPA1-215ENST00000561187 ZNF70Q9UC06 446 aaPredicted RBP33.96■■■■□ 3.03
SNRPA1-215ENST00000561187 SPDYE2Q495Y8 402 aa33.95■■■■□ 3.03
SNRPA1-215ENST00000561187 CDAN1Q8IWY9 1227 aa33.95■■■■□ 3.03
SNRPA1-215ENST00000561187 VGLL2Q8N8G2 317 aa33.95■■■■□ 3.03
SNRPA1-215ENST00000561187 R3HDMLQ9H3Y0 253 aa33.95■■■■□ 3.03
SNRPA1-215ENST00000561187 CRKP46108 304 aa33.94■■■■□ 3.02
SNRPA1-215ENST00000561187 SUPT20HL1Q3ZLR7 823 aa33.94■■■■□ 3.02
SNRPA1-215ENST00000561187 FBXO33Q7Z6M2 555 aa33.94■■■■□ 3.02
SNRPA1-215ENST00000561187 DZIP1LQ8IYY4 767 aaKnown RBP33.94■■■■□ 3.02
SNRPA1-215ENST00000561187 SERPINA10Q9UK55 444 aa33.94■■■■□ 3.02
SNRPA1-215ENST00000561187 TCP10L2B9ZVM9 353 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 PDE8BO95263 885 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 RGS19P49795 217 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 BCAMP50895 628 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 MAP3K11Q16584 847 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 CAVIN4Q5BKX8 364 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 WNK4Q96J92 1243 aa33.93■■■■□ 3.02
SNRPA1-215ENST00000561187 GPR25O00155 361 aa33.92■■■■□ 3.02
SNRPA1-215ENST00000561187 OTOFQ9HC10 1997 aa33.92■■■■□ 3.02
SNRPA1-215ENST00000561187 ALDH1L2Q3SY69 923 aa33.91■■■■□ 3.02
SNRPA1-215ENST00000561187 IREB2P48200 963 aaKnown RBP33.9■■■■□ 3.02
SNRPA1-215ENST00000561187 TNFAIP1Q13829 316 aa33.9■■■■□ 3.02
SNRPA1-215ENST00000561187 USP2O75604 605 aaPredicted RBP33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms