RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 MTMR14Q8NCE2 650 aa17.64■□□□□ 0.41
TPM1-223ENST00000560445 ZNF594Q96JF6 807 aaPredicted RBP17.64■□□□□ 0.41
TPM1-223ENST00000560445 SAGE1Q9NXZ1 904 aa17.64■□□□□ 0.41
TPM1-223ENST00000560445 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
TPM1-223ENST00000560445 UBTFL1P0CB47 393 aaPredicted RBP17.63■□□□□ 0.41
TPM1-223ENST00000560445 TTLL12Q14166 644 aaPredicted RBP17.63■□□□□ 0.41
TPM1-223ENST00000560445 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
TPM1-223ENST00000560445 ARMC9Q7Z3E5 817 aa17.63■□□□□ 0.41
TPM1-223ENST00000560445 ASTN2O75129 1339 aaPredicted RBP17.63■□□□□ 0.41
TPM1-223ENST00000560445 FAM205AQ6ZU69 1335 aa17.63■□□□□ 0.41
TPM1-223ENST00000560445 SLC10A3P09131 477 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 TBC1D22AQ8WUA7 517 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 MXD3Q9BW11 206 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 FBXO3Q9UK99 471 aa17.62■□□□□ 0.41
TPM1-223ENST00000560445 ECM29Q5VYK3 1845 aa17.61■□□□□ 0.41
TPM1-223ENST00000560445 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
TPM1-223ENST00000560445 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
TPM1-223ENST00000560445 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
TPM1-223ENST00000560445 KAZALD1Q96I82 304 aa17.61■□□□□ 0.41
TPM1-223ENST00000560445 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
TPM1-223ENST00000560445 PDE8BO95263 885 aa17.6■□□□□ 0.41
TPM1-223ENST00000560445 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
TPM1-223ENST00000560445 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
TPM1-223ENST00000560445 MFSD14BQ5SR56 506 aa17.6■□□□□ 0.41
TPM1-223ENST00000560445 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
TPM1-223ENST00000560445 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
TPM1-223ENST00000560445 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
TPM1-223ENST00000560445 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
TPM1-223ENST00000560445 ARAP2Q8WZ64 1704 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 MAST3O60307 1309 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 UNCXA6NJT0 531 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 FAM155AB1AL88 458 aaPredicted RBP17.59■□□□□ 0.41
TPM1-223ENST00000560445 PPP1R12BO60237 982 aaPredicted RBP17.59■□□□□ 0.41
TPM1-223ENST00000560445 CAPN15O75808 1086 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
TPM1-223ENST00000560445 SUPT20HL1Q3ZLR7 823 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
TPM1-223ENST00000560445 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
TPM1-223ENST00000560445 SPDYE2BA6NHP3 402 aa17.58■□□□□ 0.4
TPM1-223ENST00000560445 SNAP23O00161 211 aa17.58■□□□□ 0.4
TPM1-223ENST00000560445 SPDYE6P0CI01 402 aa17.58■□□□□ 0.4
TPM1-223ENST00000560445 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.4
TPM1-223ENST00000560445 CFAP100Q494V2 611 aa17.58■□□□□ 0.4
TPM1-223ENST00000560445 CERS5Q8N5B7 392 aa17.58■□□□□ 0.4
TPM1-223ENST00000560445 EYA2O00167 538 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 SLC5A1P13866 664 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 GYG1P46976 350 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 SREBF2Q12772 1141 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 DLK2Q6UY11 383 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 RASAL3Q86YV0 1011 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 FAM84BQ96KN1 310 aaPredicted RBP17.57■□□□□ 0.4
TPM1-223ENST00000560445 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
TPM1-223ENST00000560445 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
TPM1-223ENST00000560445 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
TPM1-223ENST00000560445 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
TPM1-223ENST00000560445 CIAO1O76071 339 aa17.56■□□□□ 0.4
TPM1-223ENST00000560445 GNAI3P08754 354 aa17.56■□□□□ 0.4
TPM1-223ENST00000560445 TNNI2P48788 182 aa17.56■□□□□ 0.4
TPM1-223ENST00000560445 HDLBPQ00341 1268 aaKnown RBP17.56■□□□□ 0.4
TPM1-223ENST00000560445 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
TPM1-223ENST00000560445 GNL3LQ9NVN8 582 aaKnown RBP17.56■□□□□ 0.4
TPM1-223ENST00000560445 TTF2Q9UNY4 1162 aaKnown RBP17.56■□□□□ 0.4
TPM1-223ENST00000560445 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
TPM1-223ENST00000560445 FBXO33Q7Z6M2 555 aa17.55■□□□□ 0.4
TPM1-223ENST00000560445 LPIN2Q92539 896 aa17.55■□□□□ 0.4
TPM1-223ENST00000560445 VEZTQ9HBM0 779 aa17.55■□□□□ 0.4
TPM1-223ENST00000560445 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
TPM1-223ENST00000560445 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
TPM1-223ENST00000560445 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
TPM1-223ENST00000560445 TMOD2Q9NZR1 351 aa17.54■□□□□ 0.4
TPM1-223ENST00000560445 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
TPM1-223ENST00000560445 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
TPM1-223ENST00000560445 IL15P40933 162 aaPredicted RBP17.53■□□□□ 0.4
TPM1-223ENST00000560445 WDR66Q8TBY9 1149 aa17.53■□□□□ 0.4
TPM1-223ENST00000560445 TEKT1Q969V4 418 aa17.53■□□□□ 0.4
TPM1-223ENST00000560445 HOOK2Q96ED9 719 aa17.53■□□□□ 0.4
TPM1-223ENST00000560445 ANGEL1Q9UNK9 670 aaKnown RBP17.53■□□□□ 0.4
TPM1-223ENST00000560445 INHBEP58166 350 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.4
TPM1-223ENST00000560445 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
TPM1-223ENST00000560445 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 MRIQ9BWK5 157 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 RNF186Q9NXI6 227 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 JAG2Q9Y219 1238 aa17.52■□□□□ 0.4
TPM1-223ENST00000560445 MYH13Q9UKX3 1938 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 SEMA3EO15041 775 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 TRPA1O75762 1119 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 ALDH1A1P00352 501 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 CRKP46108 304 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
TPM1-223ENST00000560445 MAP3K11Q16584 847 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 PRAMEF18Q5VWM3 479 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
TPM1-223ENST00000560445 PRMT6Q96LA8 375 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms