RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ARMC9Q7Z3E5 817 aa17.13■□□□□ 0.33
SMAD3-214ENST00000560402 ZNF521Q96K83 1311 aa17.13■□□□□ 0.33
SMAD3-214ENST00000560402 TAF5LO75529 589 aa17.12■□□□□ 0.33
SMAD3-214ENST00000560402 DLGAP5Q15398 846 aa17.12■□□□□ 0.33
SMAD3-214ENST00000560402 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
SMAD3-214ENST00000560402 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
SMAD3-214ENST00000560402 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 MYO1BO43795 1136 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 MOB2Q70IA6 237 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-214ENST00000560402 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
SMAD3-214ENST00000560402 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
SMAD3-214ENST00000560402 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
SMAD3-214ENST00000560402 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
SMAD3-214ENST00000560402 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
SMAD3-214ENST00000560402 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
SMAD3-214ENST00000560402 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
SMAD3-214ENST00000560402 UTYO14607 1347 aa17.1■□□□□ 0.33
SMAD3-214ENST00000560402 SNAP23O00161 211 aa17.09■□□□□ 0.33
SMAD3-214ENST00000560402 NOM1Q5C9Z4 860 aaKnown RBP17.09■□□□□ 0.33
SMAD3-214ENST00000560402 CTU1Q7Z7A3 348 aaKnown RBP17.09■□□□□ 0.33
SMAD3-214ENST00000560402 PTPRCP08575 1304 aa17.09■□□□□ 0.33
SMAD3-214ENST00000560402 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
SMAD3-214ENST00000560402 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
SMAD3-214ENST00000560402 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 UNCXA6NJT0 531 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 NEFLP07196 543 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 TM4SF4P48230 202 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.32
SMAD3-214ENST00000560402 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 OTOFQ9HC10 1997 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
SMAD3-214ENST00000560402 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 E9PSI1 815 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 MAP3K11Q16584 847 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 LDLRAD1Q5T700 205 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 CFHR5Q9BXR6 569 aa17.07■□□□□ 0.32
SMAD3-214ENST00000560402 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
SMAD3-214ENST00000560402 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
SMAD3-214ENST00000560402 PLIN1O60240 522 aa17.06■□□□□ 0.32
SMAD3-214ENST00000560402 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
SMAD3-214ENST00000560402 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
SMAD3-214ENST00000560402 PKN2Q16513 984 aaKnown RBP17.06■□□□□ 0.32
SMAD3-214ENST00000560402 RABL6Q3YEC7 729 aaPredicted RBP17.06■□□□□ 0.32
SMAD3-214ENST00000560402 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
SMAD3-214ENST00000560402 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-214ENST00000560402 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
SMAD3-214ENST00000560402 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-214ENST00000560402 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
SMAD3-214ENST00000560402 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
SMAD3-214ENST00000560402 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
SMAD3-214ENST00000560402 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
SMAD3-214ENST00000560402 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
SMAD3-214ENST00000560402 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-214ENST00000560402 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-214ENST00000560402 PRKG1Q13976 671 aa17.04■□□□□ 0.32
SMAD3-214ENST00000560402 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
SMAD3-214ENST00000560402 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
SMAD3-214ENST00000560402 BICC1Q9H694 974 aaKnown RBP17.04■□□□□ 0.32
SMAD3-214ENST00000560402 VEZTQ9HBM0 779 aa17.04■□□□□ 0.32
SMAD3-214ENST00000560402 CLRN2A0PK11 232 aa17.03■□□□□ 0.32
SMAD3-214ENST00000560402 INHBEP58166 350 aa17.03■□□□□ 0.32
SMAD3-214ENST00000560402 ZNF296Q8WUU4 475 aaPredicted RBP17.03■□□□□ 0.32
SMAD3-214ENST00000560402 FAM84BQ96KN1 310 aaPredicted RBP17.03■□□□□ 0.32
SMAD3-214ENST00000560402 RIPOR2Q9Y4F9 1068 aa17.03■□□□□ 0.32
SMAD3-214ENST00000560402 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
SMAD3-214ENST00000560402 GYG1P46976 350 aa17.02■□□□□ 0.32
SMAD3-214ENST00000560402 IREB2P48200 963 aaKnown RBP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
SMAD3-214ENST00000560402 TBC1D22AQ8WUA7 517 aa17.02■□□□□ 0.32
SMAD3-214ENST00000560402 PRMT6Q96LA8 375 aaPredicted RBP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
SMAD3-214ENST00000560402 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
SMAD3-214ENST00000560402 GPR25O00155 361 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 VPS37DQ86XT2 251 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
SMAD3-214ENST00000560402 RASA3Q14644 834 aa17■□□□□ 0.31
SMAD3-214ENST00000560402 VGLL2Q8N8G2 317 aa17■□□□□ 0.31
SMAD3-214ENST00000560402 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
SMAD3-214ENST00000560402 WNK4Q96J92 1243 aa17■□□□□ 0.31
SMAD3-214ENST00000560402 FKTNO75072 461 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 PDE8BO95263 885 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 TNNI2P48788 182 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
SMAD3-214ENST00000560402 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
SMAD3-214ENST00000560402 FBXO33Q7Z6M2 555 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms