RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 PI4K2BQ8TCG2 481 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 BACH2Q9BYV9 841 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 TAOK3Q9H2K8 898 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 BOLA2Q9H3K6 86 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 SCUBE2Q9NQ36 999 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 SBF1O95248 1867 aa7.81□□□□□ -1.16
SPG11-221ENST00000560299 XDHP47989 1333 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 SPEF2Q9C093 1822 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 GSPT1P15170 499 aaKnown RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 ATP2B4P23634 1241 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 TTF1Q15361 905 aaPredicted RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 TSHZ3Q63HK5 1081 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 RUFY2Q8WXA3 655 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 MS4A3Q96HJ5 214 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 ZNF512BQ96KM6 892 aaPredicted RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 HAUS7Q99871 368 aa7.8□□□□□ -1.16
SPG11-221ENST00000560299 TLR7Q9NYK1 1049 aaKnown RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
SPG11-221ENST00000560299 ZNF804BA4D1E1 1349 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 TAF1P21675 1872 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 LTBP1Q14766 1721 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 FRAT2O75474 233 aaPredicted RBP7.79□□□□□ -1.16
SPG11-221ENST00000560299 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 ZSCAN25Q6NSZ9 544 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 C15orf52Q6ZUT6 534 aaKnown RBP7.79□□□□□ -1.16
SPG11-221ENST00000560299 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
SPG11-221ENST00000560299 FSD1Q9BTV5 496 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 DIAPH3Q9NSV4 1193 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 GGA1Q9UJY5 639 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 AK9Q5TCS8 1911 aa7.79□□□□□ -1.16
SPG11-221ENST00000560299 C6orf229H3BNL8 230 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 FZD9O00144 591 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 SEMA3EO15041 775 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 C21orf2O43822 256 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 REC8O95072 547 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
SPG11-221ENST00000560299 ADORA1P30542 326 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 TBC1D9Q6ZT07 1266 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 ZNF804AQ7Z570 1209 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 MPNDQ8N594 471 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
SPG11-221ENST00000560299 EYA3Q99504 573 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-221ENST00000560299 PAG1Q9NWQ8 432 aa7.78□□□□□ -1.16
SPG11-221ENST00000560299 GLTPD2A6NH11 291 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 G3V3G9 751 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 GOLIM4O00461 696 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 UFL1O94874 794 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 MAP4K4O95819 1239 aaPredicted RBP7.77□□□□□ -1.17
SPG11-221ENST00000560299 ZFYP08048 801 aaPredicted RBP7.77□□□□□ -1.17
SPG11-221ENST00000560299 YY1P25490 414 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 HIBADHP31937 336 aaKnown RBP7.77□□□□□ -1.17
SPG11-221ENST00000560299 PHKA1P46020 1223 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 BCAMP50895 628 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 GPSM2P81274 684 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 KIAA2012Q0VF49 1180 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 DCAF8Q5TAQ9 597 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 DPP8Q6V1X1 898 aaPredicted RBP7.77□□□□□ -1.17
SPG11-221ENST00000560299 KIAA1211Q6ZU35 1233 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 KBTBD3Q8NAB2 608 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
SPG11-221ENST00000560299 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
SPG11-221ENST00000560299 RFX7Q2KHR2 1363 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 IGSF3O75054 1194 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 CHMLP26374 656 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 IARSP41252 1262 aaKnown RBP7.76□□□□□ -1.17
SPG11-221ENST00000560299 MFAP1P55081 439 aaKnown RBP7.76□□□□□ -1.17
SPG11-221ENST00000560299 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 C9orf131Q5VYM1 1079 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 FBXO33Q7Z6M2 555 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 GPC2Q8N158 579 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 ZGPATQ8N5A5 531 aaKnown RBP7.76□□□□□ -1.17
SPG11-221ENST00000560299 SPATA5Q8NB90 893 aa7.76□□□□□ -1.17
SPG11-221ENST00000560299 FAM84BQ96KN1 310 aaPredicted RBP7.76□□□□□ -1.17
SPG11-221ENST00000560299 MED23Q9ULK4 1368 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 SNAP23O00161 211 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 EPB41L2O43491 1005 aaKnown RBP7.75□□□□□ -1.17
SPG11-221ENST00000560299 MCAMP43121 646 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 ZAP70P43403 619 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 GYG1P46976 350 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 PRELPP51888 382 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 MAP3K12Q12852 859 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 SPTY2D1Q68D10 685 aaPredicted RBP7.75□□□□□ -1.17
SPG11-221ENST00000560299 TMED8Q6PL24 325 aaPredicted RBP7.75□□□□□ -1.17
SPG11-221ENST00000560299 CWC27Q6UX04 472 aaKnown RBP7.75□□□□□ -1.17
SPG11-221ENST00000560299 PODNQ7Z5L7 613 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
SPG11-221ENST00000560299 TBC1D16Q8TBP0 767 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 JDP2Q8WYK2 163 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 COA1Q9GZY4 146 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 TSHZ2Q9NRE2 1034 aa7.75□□□□□ -1.17
SPG11-221ENST00000560299 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms