RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 MYH2Q9UKX2 1941 aa16.64■□□□□ 0.26
TPM1-220ENST00000559556 TAF5LO75529 589 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 SLC34A2O95436 690 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
TPM1-220ENST00000559556 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 HELBQ8NG08 1087 aaPredicted RBP16.64■□□□□ 0.25
TPM1-220ENST00000559556 CFHR5Q9BXR6 569 aa16.64■□□□□ 0.25
TPM1-220ENST00000559556 GRM8O00222 908 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
TPM1-220ENST00000559556 DLGAP5Q15398 846 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
TPM1-220ENST00000559556 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
TPM1-220ENST00000559556 CHMP3Q9Y3E7 222 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
TPM1-220ENST00000559556 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
TPM1-220ENST00000559556 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
TPM1-220ENST00000559556 MAP3K11Q16584 847 aa16.62■□□□□ 0.25
TPM1-220ENST00000559556 DEFB129Q9H1M3 183 aa16.62■□□□□ 0.25
TPM1-220ENST00000559556 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
TPM1-220ENST00000559556 MGAMO43451 1857 aa16.62■□□□□ 0.25
TPM1-220ENST00000559556 PTPRFP10586 1907 aa16.62■□□□□ 0.25
TPM1-220ENST00000559556 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 ANP32CO43423 234 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 SOX10P56693 466 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 PRKG1Q13976 671 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
TPM1-220ENST00000559556 PCDHAC2Q9Y5I4 1007 aa16.61■□□□□ 0.25
TPM1-220ENST00000559556 GPR25O00155 361 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
TPM1-220ENST00000559556 CFAP100Q494V2 611 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 ZNF594Q96JF6 807 aaPredicted RBP16.6■□□□□ 0.25
TPM1-220ENST00000559556 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 FAM205AQ6ZU69 1335 aa16.6■□□□□ 0.25
TPM1-220ENST00000559556 MYO1BO43795 1136 aa16.59■□□□□ 0.25
TPM1-220ENST00000559556 ZBTB48P10074 688 aaPredicted RBP16.59■□□□□ 0.25
TPM1-220ENST00000559556 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
TPM1-220ENST00000559556 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
TPM1-220ENST00000559556 C9orf78Q9NZ63 289 aaPredicted RBP16.59■□□□□ 0.25
TPM1-220ENST00000559556 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
TPM1-220ENST00000559556 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
TPM1-220ENST00000559556 F8W031 263 aaPredicted RBP16.58■□□□□ 0.24
TPM1-220ENST00000559556 PRMT6Q96LA8 375 aaPredicted RBP16.58■□□□□ 0.24
TPM1-220ENST00000559556 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
TPM1-220ENST00000559556 AOX1Q06278 1338 aa16.58■□□□□ 0.24
TPM1-220ENST00000559556 UTYO14607 1347 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
TPM1-220ENST00000559556 PPP1R12BO60237 982 aaPredicted RBP16.57■□□□□ 0.24
TPM1-220ENST00000559556 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 CLMNQ96JQ2 1002 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 R3HDMLQ9H3Y0 253 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
TPM1-220ENST00000559556 PLIN1O60240 522 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 FKTNO75072 461 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 INHBEP58166 350 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 FBXO46Q6PJ61 603 aaPredicted RBP16.56■□□□□ 0.24
TPM1-220ENST00000559556 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
TPM1-220ENST00000559556 SLC10A4Q96EP9 437 aa16.56■□□□□ 0.24
TPM1-220ENST00000559556 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
TPM1-220ENST00000559556 IFNL1Q8IU54 200 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 SERPINA10Q9UK55 444 aa16.55■□□□□ 0.24
TPM1-220ENST00000559556 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
TPM1-220ENST00000559556 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
TPM1-220ENST00000559556 FAM84BQ96KN1 310 aaPredicted RBP16.54■□□□□ 0.24
TPM1-220ENST00000559556 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
TPM1-220ENST00000559556 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
TPM1-220ENST00000559556 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
TPM1-220ENST00000559556 ATAD5Q96QE3 1844 aa16.54■□□□□ 0.24
TPM1-220ENST00000559556 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
TPM1-220ENST00000559556 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
TPM1-220ENST00000559556 IGF2BP3O00425 579 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM1-220ENST00000559556 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
TPM1-220ENST00000559556 HIBADHP31937 336 aaKnown RBP16.53■□□□□ 0.24
TPM1-220ENST00000559556 GYG1P46976 350 aa16.53■□□□□ 0.24
TPM1-220ENST00000559556 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
TPM1-220ENST00000559556 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
TPM1-220ENST00000559556 RASA3Q14644 834 aa16.53■□□□□ 0.24
TPM1-220ENST00000559556 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
TPM1-220ENST00000559556 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
TPM1-220ENST00000559556 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms