RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 APBB1O00213 710 aa25■■□□□ 1.59
TSPAN3-207ENST00000559494 RAB11FIP3O75154 756 aa25■■□□□ 1.59
TSPAN3-207ENST00000559494 FRAT2O75474 233 aaPredicted RBP25■■□□□ 1.59
TSPAN3-207ENST00000559494 POTEIP0CG38 1075 aa25■■□□□ 1.59
TSPAN3-207ENST00000559494 POTEJP0CG39 1038 aa25■■□□□ 1.59
TSPAN3-207ENST00000559494 EAF2Q96CJ1 260 aaPredicted RBP25■■□□□ 1.59
TSPAN3-207ENST00000559494 DCTPP1Q9H773 170 aa25■■□□□ 1.59
TSPAN3-207ENST00000559494 ADARB2Q9NS39 739 aaKnown RBP25■■□□□ 1.59
TSPAN3-207ENST00000559494 TOMM70O94826 608 aa24.99■■□□□ 1.59
TSPAN3-207ENST00000559494 FKBP1AP62942 108 aaKnown RBP24.99■■□□□ 1.59
TSPAN3-207ENST00000559494 CHAF1AQ13111 956 aaPredicted RBP24.99■■□□□ 1.59
TSPAN3-207ENST00000559494 KIF1BPQ96EK5 621 aa24.99■■□□□ 1.59
TSPAN3-207ENST00000559494 IL1RAPL2Q9NP60 686 aa24.99■■□□□ 1.59
TSPAN3-207ENST00000559494 MYO3BQ8WXR4 1341 aa24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 USP17L8P0C7I0 530 aa24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 EAPPQ56P03 285 aaPredicted RBP24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 SAMD7Q7Z3H4 446 aa24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 DBNDD2Q9BQY9 259 aa24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 CCDC8Q9H0W5 538 aaPredicted RBP24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 GNL3LQ9NVN8 582 aaKnown RBP24.98■■□□□ 1.59
TSPAN3-207ENST00000559494 ARAP2Q8WZ64 1704 aa24.97■■□□□ 1.59
TSPAN3-207ENST00000559494 HIRAP54198 1017 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-207ENST00000559494 ZNF280AP59817 542 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-207ENST00000559494 USP50Q70EL3 339 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-207ENST00000559494 PNMA8AQ86V59 439 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-207ENST00000559494 ZBTB22O15209 634 aa24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 EGFRP00533 1210 aa24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 GORABQ5T7V8 394 aa24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 KIAA0825Q8IV33 1275 aa24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 RBM46Q8TBY0 533 aaKnown RBP24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 TRPM4Q8TD43 1214 aa24.96■■□□□ 1.59
TSPAN3-207ENST00000559494 TBC1D10BQ4KMP7 808 aaPredicted RBP24.95■■□□□ 1.58
TSPAN3-207ENST00000559494 MFSD14BQ5SR56 506 aa24.95■■□□□ 1.58
TSPAN3-207ENST00000559494 RBM26Q5T8P6 1007 aaKnown RBP24.95■■□□□ 1.58
TSPAN3-207ENST00000559494 TLR7Q9NYK1 1049 aaKnown RBP24.95■■□□□ 1.58
TSPAN3-207ENST00000559494 DBNLQ9UJU6 430 aaKnown RBP24.95■■□□□ 1.58
TSPAN3-207ENST00000559494 GRIK5Q16478 980 aa24.94■■□□□ 1.58
TSPAN3-207ENST00000559494 COL1A1P02452 1464 aaPredicted RBP24.94■■□□□ 1.58
TSPAN3-207ENST00000559494 SEMA3EO15041 775 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 HDAC1Q13547 482 aaPredicted RBP24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 RASGRF1Q13972 1273 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 AACSQ86V21 672 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 LDHDQ86WU2 507 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 CLASRPQ8N2M8 674 aaKnown RBP24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 DENND2AQ9ULE3 1009 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 CLEC11AQ9Y240 323 aa24.93■■□□□ 1.58
TSPAN3-207ENST00000559494 F8W031 263 aaPredicted RBP24.92■■□□□ 1.58
TSPAN3-207ENST00000559494 SMARCA5O60264 1052 aaPredicted RBP24.92■■□□□ 1.58
TSPAN3-207ENST00000559494 WDR66Q8TBY9 1149 aa24.92■■□□□ 1.58
TSPAN3-207ENST00000559494 TBC1D22AQ8WUA7 517 aa24.92■■□□□ 1.58
TSPAN3-207ENST00000559494 LRRCC1Q9C099 1032 aa24.92■■□□□ 1.58
TSPAN3-207ENST00000559494 ARID4AP29374 1257 aaPredicted RBP24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 CCDC158Q5M9N0 1113 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 CHADLQ6NUI6 762 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 OGFOD1Q8N543 542 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 BCL11AQ9H165 835 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 MYOZ2Q9NPC6 264 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 MYH13Q9UKX3 1938 aa24.91■■□□□ 1.58
TSPAN3-207ENST00000559494 UQCRFS1P1P0C7P4 283 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 MMP14P50281 582 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 SCARF1Q14162 830 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 KIF4BQ2VIQ3 1234 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 SMC1BQ8NDV3 1235 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 HMG20BQ9P0W2 317 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 PGAP2Q9UHJ9 254 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 HDAC9Q9UKV0 1011 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 ADAMTSL1Q8N6G6 1762 aa24.9■■□□□ 1.58
TSPAN3-207ENST00000559494 C1QTNF8P60827 252 aa24.89■■□□□ 1.58
TSPAN3-207ENST00000559494 TTC39AQ5SRH9 613 aa24.89■■□□□ 1.58
TSPAN3-207ENST00000559494 MCAMP43121 646 aa24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 FSTL1Q12841 308 aa24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 PI16Q6UXB8 463 aa24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 ZNF512BQ96KM6 892 aaPredicted RBP24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 TTF2Q9UNY4 1162 aaKnown RBP24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 PDS5AQ29RF7 1337 aaKnown RBP24.88■■□□□ 1.57
TSPAN3-207ENST00000559494 IGHDP01880 384 aa24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 IFIT2P09913 472 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 MAP1SQ66K74 1059 aaPredicted RBP24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 SPATA5Q8NB90 893 aa24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 ZC3H15Q8WU90 426 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 RWDD1Q9H446 243 aaPredicted RBP24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 PCDHAC2Q9Y5I4 1007 aa24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 POLR2AP24928 1970 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 SALL1Q9NSC2 1324 aa24.87■■□□□ 1.57
TSPAN3-207ENST00000559494 CENPBP07199 599 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 ZBED3Q96IU2 234 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 SNRKQ9NRH2 765 aa24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 SUGT1Q9Y2Z0 365 aa24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 ASTN2O75129 1339 aaPredicted RBP24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 NBPF9Q3BBW0 867 aa24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 CNTROBQ8N137 903 aa24.86■■□□□ 1.57
TSPAN3-207ENST00000559494 AKAP11Q9UKA4 1901 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 WNT10BO00744 389 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 ITGBL1O95965 494 aaPredicted RBP24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 PRDX5P30044 214 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 CFAP100Q494V2 611 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 MTMR14Q8NCE2 650 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 GCC1Q96CN9 775 aa24.85■■□□□ 1.57
TSPAN3-207ENST00000559494 DLGAP5Q15398 846 aa24.84■■□□□ 1.57
TSPAN3-207ENST00000559494 TBC1D9Q6ZT07 1266 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms