RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
SPG11-216ENST00000559347 OGFOD1Q8N543 542 aa13.68□□□□□ -0.22
SPG11-216ENST00000559347 FAM84BQ96KN1 310 aaPredicted RBP13.68□□□□□ -0.22
SPG11-216ENST00000559347 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
SPG11-216ENST00000559347 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
SPG11-216ENST00000559347 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 MMP14P50281 582 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
SPG11-216ENST00000559347 MTX1Q13505 466 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 PUM3Q15397 648 aaKnown RBP13.67□□□□□ -0.22
SPG11-216ENST00000559347 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 NBPF9Q3BBW0 867 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 SAPCD2Q86UD0 394 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
SPG11-216ENST00000559347 SIL1Q9H173 461 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 JAG2Q9Y219 1238 aa13.67□□□□□ -0.22
SPG11-216ENST00000559347 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
SPG11-216ENST00000559347 WNT10BO00744 389 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 CIAO1O76071 339 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 SASH1O94885 1247 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
SPG11-216ENST00000559347 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
SPG11-216ENST00000559347 FGFR2P21802 821 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 HIBADHP31937 336 aaKnown RBP13.66□□□□□ -0.22
SPG11-216ENST00000559347 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
SPG11-216ENST00000559347 HDAC9Q9UKV0 1011 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 LAMB1P07942 1786 aa13.66□□□□□ -0.22
SPG11-216ENST00000559347 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
SPG11-216ENST00000559347 OTOFQ9HC10 1997 aa13.65□□□□□ -0.22
SPG11-216ENST00000559347 FBXO33Q7Z6M2 555 aa13.65□□□□□ -0.22
SPG11-216ENST00000559347 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
SPG11-216ENST00000559347 HHIPL1Q96JK4 782 aa13.65□□□□□ -0.22
SPG11-216ENST00000559347 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SPG11-216ENST00000559347 PA2G4Q9UQ80 394 aaKnown RBP13.65□□□□□ -0.22
SPG11-216ENST00000559347 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
SPG11-216ENST00000559347 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
SPG11-216ENST00000559347 MFSD14BQ5SR56 506 aa13.64□□□□□ -0.23
SPG11-216ENST00000559347 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
SPG11-216ENST00000559347 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
SPG11-216ENST00000559347 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
SPG11-216ENST00000559347 CAPNS2Q96L46 248 aa13.64□□□□□ -0.23
SPG11-216ENST00000559347 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
SPG11-216ENST00000559347 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
SPG11-216ENST00000559347 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 GNAI2P04899 355 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 RLBP1P12271 317 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 SLC5A1P13866 664 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 ECE1P42892 770 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 DZIP1LQ8IYY4 767 aaKnown RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 MTMR14Q8NCE2 650 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 LPIN2Q92539 896 aa13.63□□□□□ -0.23
SPG11-216ENST00000559347 GBA2Q9HCG7 927 aaPredicted RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
SPG11-216ENST00000559347 BCAMP50895 628 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 HUNKP57058 714 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 APOBEC3FQ8IUX4 373 aaKnown RBP13.62□□□□□ -0.23
SPG11-216ENST00000559347 PCDHAC2Q9Y5I4 1007 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 MAST2Q6P0Q8 1798 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
SPG11-216ENST00000559347 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 MYH2Q9UKX2 1941 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 PNMA6EA0A0J9YXQ4 647 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 CHAF1AQ13111 956 aaPredicted RBP13.61□□□□□ -0.23
SPG11-216ENST00000559347 GRM1Q13255 1194 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 AOX1Q06278 1338 aa13.61□□□□□ -0.23
SPG11-216ENST00000559347 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
SPG11-216ENST00000559347 GRIK5Q16478 980 aa13.6□□□□□ -0.23
SPG11-216ENST00000559347 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
SPG11-216ENST00000559347 TBC1D22AQ8WUA7 517 aa13.6□□□□□ -0.23
SPG11-216ENST00000559347 TTF2Q9UNY4 1162 aaKnown RBP13.6□□□□□ -0.23
SPG11-216ENST00000559347 FOXN1O15353 648 aa13.59□□□□□ -0.23
SPG11-216ENST00000559347 AOC2O75106 756 aa13.59□□□□□ -0.23
SPG11-216ENST00000559347 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
SPG11-216ENST00000559347 SERPINA10Q9UK55 444 aa13.59□□□□□ -0.23
SPG11-216ENST00000559347 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 MYO1BO43795 1136 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 ADORA1P30542 326 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPG11-216ENST00000559347 FKBP1BP68106 108 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 PANK1Q8TE04 598 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
SPG11-216ENST00000559347 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
SPG11-216ENST00000559347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
SPG11-216ENST00000559347 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
SPG11-216ENST00000559347 MYO5AQ9Y4I1 1855 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms