RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 AOX1Q06278 1338 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 ECM29Q5VYK3 1845 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 ARID4AP29374 1257 aaPredicted RBP13.42□□□□□ -0.26
TPM1-217ENST00000559108 MCAMP43121 646 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 EIF6P56537 245 aaKnown RBP13.42□□□□□ -0.26
TPM1-217ENST00000559108 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
TPM1-217ENST00000559108 PCDHAC2Q9Y5I4 1007 aa13.42□□□□□ -0.26
TPM1-217ENST00000559108 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 EPS15P42566 896 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
TPM1-217ENST00000559108 STRIP1Q5VSL9 837 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
TPM1-217ENST00000559108 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
TPM1-217ENST00000559108 G3V3G9 751 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 PDE4AP27815 886 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 TTLL5Q6EMB2 1281 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
TPM1-217ENST00000559108 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 MYH7P12883 1935 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 MYH2Q9UKX2 1941 aa13.4□□□□□ -0.26
TPM1-217ENST00000559108 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.27
TPM1-217ENST00000559108 KIF3CO14782 793 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 ZBTB22O15209 634 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 HIRAP54198 1017 aaPredicted RBP13.39□□□□□ -0.27
TPM1-217ENST00000559108 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
TPM1-217ENST00000559108 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
TPM1-217ENST00000559108 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
TPM1-217ENST00000559108 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
TPM1-217ENST00000559108 NUCB1Q02818 461 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 TNIP1Q15025 636 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 MICALL2Q8IY33 904 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 SPATA5Q8NB90 893 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 ZNF512BQ96KM6 892 aaPredicted RBP13.38□□□□□ -0.27
TPM1-217ENST00000559108 ANTXR1Q9H6X2 564 aa13.38□□□□□ -0.27
TPM1-217ENST00000559108 F8W031 263 aaPredicted RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 CHGBP05060 677 aa13.37□□□□□ -0.27
TPM1-217ENST00000559108 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 PRDX5P30044 214 aa13.37□□□□□ -0.27
TPM1-217ENST00000559108 ZAP70P43403 619 aa13.37□□□□□ -0.27
TPM1-217ENST00000559108 ZNF280AP59817 542 aaPredicted RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
TPM1-217ENST00000559108 PI4K2BQ8TCG2 481 aa13.37□□□□□ -0.27
TPM1-217ENST00000559108 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 PIH1D3Q9NQM4 214 aaKnown RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 CNOT7Q9UIV1 285 aaKnown RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 PDS5AQ29RF7 1337 aaKnown RBP13.37□□□□□ -0.27
TPM1-217ENST00000559108 SEMA3EO15041 775 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
TPM1-217ENST00000559108 FKBP1AP62942 108 aaKnown RBP13.36□□□□□ -0.27
TPM1-217ENST00000559108 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
TPM1-217ENST00000559108 GORABQ5T7V8 394 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 CHD1LQ86WJ1 897 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 DPF2Q92785 391 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 ZBED3Q96IU2 234 aaPredicted RBP13.36□□□□□ -0.27
TPM1-217ENST00000559108 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
TPM1-217ENST00000559108 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 NEFLP07196 543 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
TPM1-217ENST00000559108 EPHX2P34913 555 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
TPM1-217ENST00000559108 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
TPM1-217ENST00000559108 HACL1Q9UJ83 578 aa13.35□□□□□ -0.27
TPM1-217ENST00000559108 FRAT2O75474 233 aaPredicted RBP13.34□□□□□ -0.27
TPM1-217ENST00000559108 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 ATP5JP18859 108 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 BOLA2Q9H3K6 86 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 TTF2Q9UNY4 1162 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms