RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ANAPC16Q96DE5 110 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 TMEM74Q96NL1 305 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 NSUN5Q96P11 429 aaKnown RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 OSMRQ99650 979 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 TRIM56Q9BRZ2 755 aaKnown RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 CEP44Q9C0F1 390 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 CRISPLD1Q9H336 500 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 GPN3Q9UHW5 284 aaPredicted RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 PPM1HQ9ULR3 514 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 MRVI1Q9Y6F6 885 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 CCDC85CA6NKD9 419 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 FAM177BA6PVY3 158 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 GRNP28799 593 aaKnown RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 PLAURQ03405 335 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 RBL2Q08999 1139 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SPEM2Q0P670 501 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 APOBRQ0VD83 1088 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 NEUROD1Q13562 356 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SAMD5Q5TGI4 173 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SDE2Q6IQ49 451 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 PRPF40BQ6NWY9 871 aaKnown RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 RAB44Q7Z6P3 723 aaPredicted RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 ANKRD13AQ8IZ07 590 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 C3orf58Q8NDZ4 430 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 OR13H1Q8NG92 308 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SEC16BQ96JE7 1060 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SRPK1Q96SB4 655 aaKnown RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 ZKSCAN3Q9BRR0 538 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 RSRP1Q9BUV0 290 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 GSX2Q9BZM3 304 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 NUCKS1Q9H1E3 243 aaKnown RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 PIF1Q9H611 641 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 ZFYVE1Q9HBF4 777 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 C11orf16Q9NQ32 467 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 ADAMTS1Q9UHI8 967 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 TLR6Q9Y2C9 796 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SUPT16HQ9Y5B9 1047 aaKnown RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 PCDHGC4Q9Y5F7 938 aa3.34□□□□□ -1.87
GABPB1-209ENST00000559100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 SOS2Q07890 1332 aaPredicted RBP3.34□□□□□ -1.87
GABPB1-209ENST00000559100 CADPSQ9ULU8 1353 aa3.34□□□□□ -1.88
GABPB1-209ENST00000559100 TRPA1O75762 1119 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 GHRHP01286 108 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 CELA2BP08218 269 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 CELA3AP09093 270 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 FAM157BP0CG42 384 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 CD33P20138 364 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 MCM4P33991 863 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 LIG3P49916 1009 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 MLLT1Q03111 559 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 LBRQ14739 615 aaKnown RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 PEAR1Q5VY43 1037 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 TTBK2Q6IQ55 1244 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 ANKS3Q6ZW76 656 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 DHX32Q7L7V1 743 aaKnown RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 MICALL1Q8N3F8 863 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 GOLM1Q8NBJ4 401 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 GLIS3Q8NEA6 775 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 ABHD17AQ96GS6 310 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 RBSNQ9H1K0 784 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF408Q9H9D4 720 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 ABCB6Q9NP58 842 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 GINM1Q9NU53 330 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 TLR7Q9NYK1 1049 aaKnown RBP3.33□□□□□ -1.88
GABPB1-209ENST00000559100 MARK1Q9P0L2 795 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 ZFATQ9P243 1243 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 SALL4Q9UJQ4 1053 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 DNMT3LQ9UJW3 386 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 PRR12Q9ULL5 1215 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 STRIP2Q9ULQ0 834 aa3.33□□□□□ -1.88
GABPB1-209ENST00000559100 METTL12A8MUP2 240 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 H7C1W4 665 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 PDE2AO00408 941 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 TLR3O15455 904 aaKnown RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 ADAMTS2O95450 1211 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 PF4P02776 101 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 MAPTP10636 758 aaKnown RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 ACPPP15309 386 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 EIF2AK2P19525 551 aaKnown RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 ETFBP38117 255 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 GRIA4P48058 902 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF157P51786 506 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 KCNQ4P56696 695 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 PPP2R3AQ06190 1150 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 CAMK2GQ13555 558 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 SPRED3Q2MJR0 410 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 SEZ6Q53EL9 994 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 COL13A1Q5TAT6 717 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 FBXL19Q6PCT2 694 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 CCDC81Q6ZN84 652 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF662Q6ZS27 426 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 HFE2Q6ZVN8 426 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 CCNJLQ8IV13 435 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 PHC3Q8NDX5 983 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 RASGRP4Q8TDF6 673 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 JARID2Q92833 1246 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 NKD1Q969G9 470 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 FERD3LQ96RJ6 166 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms