RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 CERS5Q8N5B7 392 aa26.83■■□□□ 1.89
CRNDE-205ENST00000558952 TDRD7Q8NHU6 1098 aaKnown RBP26.83■■□□□ 1.89
CRNDE-205ENST00000558952 WBP1LQ9NX94 342 aa26.83■■□□□ 1.89
CRNDE-205ENST00000558952 JAG2Q9Y219 1238 aa26.83■■□□□ 1.89
CRNDE-205ENST00000558952 POLR2AP24928 1970 aaKnown RBP26.82■■□□□ 1.88
CRNDE-205ENST00000558952 F8W031 263 aaPredicted RBP26.82■■□□□ 1.88
CRNDE-205ENST00000558952 GNAI3P08754 354 aa26.82■■□□□ 1.88
CRNDE-205ENST00000558952 RFX5P48382 616 aaPredicted RBP26.82■■□□□ 1.88
CRNDE-205ENST00000558952 DLGAP5Q15398 846 aa26.82■■□□□ 1.88
CRNDE-205ENST00000558952 ATF7IPQ6VMQ6 1270 aa26.82■■□□□ 1.88
CRNDE-205ENST00000558952 MEIS3Q99687 375 aa26.82■■□□□ 1.88
CRNDE-205ENST00000558952 FOXN1O15353 648 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 TRIM27P14373 513 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 MAP2K2P36507 400 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 PTPN12Q05209 780 aaKnown RBP26.81■■□□□ 1.88
CRNDE-205ENST00000558952 VGLL2Q8N8G2 317 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 BEGAINQ9BUH8 593 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 ZBED9Q6R2W3 1325 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 FAM205AQ6ZU69 1335 aa26.81■■□□□ 1.88
CRNDE-205ENST00000558952 THSD7BQ9C0I4 1608 aa26.8■■□□□ 1.88
CRNDE-205ENST00000558952 FRAT2O75474 233 aaPredicted RBP26.8■■□□□ 1.88
CRNDE-205ENST00000558952 IFIT1P09914 478 aaKnown RBP26.8■■□□□ 1.88
CRNDE-205ENST00000558952 PUM3Q15397 648 aaKnown RBP26.8■■□□□ 1.88
CRNDE-205ENST00000558952 COL13A1Q5TAT6 717 aaPredicted RBP26.8■■□□□ 1.88
CRNDE-205ENST00000558952 APOBEC3FQ8IUX4 373 aaKnown RBP26.8■■□□□ 1.88
CRNDE-205ENST00000558952 PCNTO95613 3336 aa26.8■■□□□ 1.88
CRNDE-205ENST00000558952 AOC2O75106 756 aa26.79■■□□□ 1.88
CRNDE-205ENST00000558952 CTCFP49711 727 aaPredicted RBP26.79■■□□□ 1.88
CRNDE-205ENST00000558952 MFSD14BQ5SR56 506 aa26.79■■□□□ 1.88
CRNDE-205ENST00000558952 FBXO3Q9UK99 471 aa26.79■■□□□ 1.88
CRNDE-205ENST00000558952 SCAF8Q9UPN6 1271 aaKnown RBP26.79■■□□□ 1.88
CRNDE-205ENST00000558952 IFFO2Q5TF58 517 aa26.78■■□□□ 1.88
CRNDE-205ENST00000558952 RGMBQ6NW40 437 aa26.78■■□□□ 1.88
CRNDE-205ENST00000558952 FBXO33Q7Z6M2 555 aa26.78■■□□□ 1.88
CRNDE-205ENST00000558952 SIL1Q9H173 461 aa26.78■■□□□ 1.88
CRNDE-205ENST00000558952 MYO1BO43795 1136 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 SLC5A1P13866 664 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 FKBP1BP68106 108 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 ZKSCAN2Q63HK3 967 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 MTMR14Q8NCE2 650 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 CLUAP1Q96AJ1 413 aa26.77■■□□□ 1.88
CRNDE-205ENST00000558952 ZBED3Q96IU2 234 aaPredicted RBP26.77■■□□□ 1.88
CRNDE-205ENST00000558952 CIAO1O76071 339 aa26.76■■□□□ 1.87
CRNDE-205ENST00000558952 NF2P35240 595 aa26.76■■□□□ 1.87
CRNDE-205ENST00000558952 RBM5P52756 815 aaKnown RBP eCLIP26.76■■□□□ 1.87
CRNDE-205ENST00000558952 NOGQ13253 232 aa26.76■■□□□ 1.87
CRNDE-205ENST00000558952 CFAP100Q494V2 611 aa26.76■■□□□ 1.87
CRNDE-205ENST00000558952 IQSEC3Q9UPP2 1182 aaPredicted RBP26.76■■□□□ 1.87
CRNDE-205ENST00000558952 ZNF157P51786 506 aaPredicted RBP26.75■■□□□ 1.87
CRNDE-205ENST00000558952 CHAF1AQ13111 956 aaPredicted RBP26.75■■□□□ 1.87
CRNDE-205ENST00000558952 ATG9AQ7Z3C6 839 aa26.75■■□□□ 1.87
CRNDE-205ENST00000558952 LPIN2Q92539 896 aa26.75■■□□□ 1.87
CRNDE-205ENST00000558952 CCDC102AQ96A19 550 aa26.75■■□□□ 1.87
CRNDE-205ENST00000558952 CEP126Q9P2H0 1117 aa26.75■■□□□ 1.87
CRNDE-205ENST00000558952 FGFR2P21802 821 aa26.74■■□□□ 1.87
CRNDE-205ENST00000558952 PRAMEF18Q5VWM3 479 aa26.74■■□□□ 1.87
CRNDE-205ENST00000558952 TBC1D22AQ8WUA7 517 aa26.74■■□□□ 1.87
CRNDE-205ENST00000558952 TTF2Q9UNY4 1162 aaKnown RBP26.74■■□□□ 1.87
CRNDE-205ENST00000558952 TNNQ9UQP3 1299 aa26.74■■□□□ 1.87
CRNDE-205ENST00000558952 SPDYE2BA6NHP3 402 aa26.73■■□□□ 1.87
CRNDE-205ENST00000558952 SPDYE6P0CI01 402 aa26.73■■□□□ 1.87
CRNDE-205ENST00000558952 IL15P40933 162 aaPredicted RBP26.73■■□□□ 1.87
CRNDE-205ENST00000558952 BCAMP50895 628 aa26.73■■□□□ 1.87
CRNDE-205ENST00000558952 TTLL12Q14166 644 aaPredicted RBP26.73■■□□□ 1.87
CRNDE-205ENST00000558952 TNS4Q8IZW8 715 aa26.73■■□□□ 1.87
CRNDE-205ENST00000558952 PAPPA2Q9BXP8 1791 aa26.72■■□□□ 1.87
CRNDE-205ENST00000558952 SRGAP3O43295 1099 aa26.72■■□□□ 1.87
CRNDE-205ENST00000558952 COPRSQ9NQ92 184 aa26.72■■□□□ 1.87
CRNDE-205ENST00000558952 PRDM10Q9NQV6 1147 aa26.72■■□□□ 1.87
CRNDE-205ENST00000558952 PA2G4Q9UQ80 394 aaKnown RBP26.72■■□□□ 1.87
CRNDE-205ENST00000558952 COL1A1P02452 1464 aaPredicted RBP26.72■■□□□ 1.87
CRNDE-205ENST00000558952 GNAI2P04899 355 aa26.71■■□□□ 1.87
CRNDE-205ENST00000558952 ATP2B3Q16720 1220 aa26.71■■□□□ 1.87
CRNDE-205ENST00000558952 FTSJ3Q8IY81 847 aaKnown RBP26.71■■□□□ 1.87
CRNDE-205ENST00000558952 SERPINA10Q9UK55 444 aa26.71■■□□□ 1.87
CRNDE-205ENST00000558952 PCDHAC2Q9Y5I4 1007 aa26.71■■□□□ 1.87
CRNDE-205ENST00000558952 LBX1P52954 281 aa26.7■■□□□ 1.86
CRNDE-205ENST00000558952 TMEM57Q8N5G2 664 aa26.7■■□□□ 1.86
CRNDE-205ENST00000558952 PRMT6Q96LA8 375 aaPredicted RBP26.7■■□□□ 1.86
CRNDE-205ENST00000558952 VEZTQ9HBM0 779 aa26.7■■□□□ 1.86
CRNDE-205ENST00000558952 ARAP2Q8WZ64 1704 aa26.7■■□□□ 1.86
CRNDE-205ENST00000558952 CLRN2A0PK11 232 aa26.69■■□□□ 1.86
CRNDE-205ENST00000558952 HSPA8P11142 646 aaKnown RBP26.69■■□□□ 1.86
CRNDE-205ENST00000558952 MTX1Q13505 466 aa26.69■■□□□ 1.86
CRNDE-205ENST00000558952 DEFB129Q9H1M3 183 aa26.69■■□□□ 1.86
CRNDE-205ENST00000558952 PPP2R3BQ9Y5P8 575 aa26.69■■□□□ 1.86
CRNDE-205ENST00000558952 FAM155AB1AL88 458 aaPredicted RBP26.68■■□□□ 1.86
CRNDE-205ENST00000558952 CA12O43570 354 aa26.68■■□□□ 1.86
CRNDE-205ENST00000558952 SLC10A3P09131 477 aa26.67■■□□□ 1.86
CRNDE-205ENST00000558952 GNL3LQ9NVN8 582 aaKnown RBP26.67■■□□□ 1.86
CRNDE-205ENST00000558952 UBE2Q2LH0YL09 131 aa26.66■■□□□ 1.86
CRNDE-205ENST00000558952 CRKP46108 304 aa26.66■■□□□ 1.86
CRNDE-205ENST00000558952 MOB2Q70IA6 237 aa26.66■■□□□ 1.86
CRNDE-205ENST00000558952 ARMC9Q7Z3E5 817 aa26.66■■□□□ 1.86
CRNDE-205ENST00000558952 DZIP1LQ8IYY4 767 aaKnown RBP26.66■■□□□ 1.86
CRNDE-205ENST00000558952 ECM29Q5VYK3 1845 aa26.66■■□□□ 1.86
CRNDE-205ENST00000558952 TNFAIP1Q13829 316 aa26.65■■□□□ 1.86
CRNDE-205ENST00000558952 WDR66Q8TBY9 1149 aa26.65■■□□□ 1.86
CRNDE-205ENST00000558952 ZIC5Q96T25 663 aa26.65■■□□□ 1.86
CRNDE-205ENST00000558952 SUGT1Q9Y2Z0 365 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms