RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TMED8Q6PL24 325 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-211ENST00000558890 PLEKHM2Q8IWE5 1019 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 GPC2Q8N158 579 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 LPIN2Q92539 896 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 FAM84BQ96KN1 310 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-211ENST00000558890 CHMP5Q9NZZ3 219 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 TTC41PQ6P2S7 1318 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 SEMA3EO15041 775 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 IFIT1P09914 478 aaKnown RBP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 GSPT1P15170 499 aaKnown RBP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 SCNN1DP51172 638 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 OS9Q13438 667 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 GSE1Q14687 1217 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 FBXO33Q7Z6M2 555 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 EYA3Q99504 573 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 ZC3H12CQ9C0D7 883 aaKnown RBP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 DBNDD1Q9H9R9 158 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
LRRC28-211ENST00000558890 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 SALL3Q9BXA9 1300 aa9.3□□□□□ -0.92
LRRC28-211ENST00000558890 CEP350Q5VT06 3117 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 ZNF646O15015 1829 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-211ENST00000558890 WDR90Q96KV7 1748 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 PSMD14O00487 310 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 ECE2O60344 883 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 FRAT2O75474 233 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-211ENST00000558890 RAD17O75943 681 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 SLC5A1P13866 664 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 IL1R1P14778 569 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-211ENST00000558890 EPS15P42566 896 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 ATP2B3Q16720 1220 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 PODNQ7Z5L7 613 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 NIM1KQ8IY84 436 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-211ENST00000558890 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 ANTXR1Q9H6X2 564 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 FPGT-TNNI3KV9GXZ4 949 aa9.29□□□□□ -0.92
LRRC28-211ENST00000558890 DOCK2Q92608 1830 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 SHTN1A0MZ66 631 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 APBB1O00213 710 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 REC8O95072 547 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 HSP90AA1P07900 732 aaKnown RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 POTEJP0CG39 1038 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 MMP14P50281 582 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 HIRAP54198 1017 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 EIF6P56537 245 aaKnown RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 DACT2Q5SW24 774 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 CIAPIN1Q6FI81 312 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 TDRD7Q8NHU6 1098 aaKnown RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 DPF2Q92785 391 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 GPATCH3Q96I76 525 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 SIL1Q9H173 461 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 TAF1DQ9H5J8 278 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 CD209Q9NNX6 404 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
LRRC28-211ENST00000558890 CIZ1Q9ULV3 898 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-211ENST00000558890 MAST2Q6P0Q8 1798 aa9.27□□□□□ -0.92
LRRC28-211ENST00000558890 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 A0A1B0GUL7 405 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 UQCRFS1P1P0C7P4 283 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-211ENST00000558890 GMPSP49915 693 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-211ENST00000558890 TFCP2Q12800 502 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 TNIP1Q15025 636 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 RABEP1Q15276 862 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 PGAP2Q9UHJ9 254 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 TIAM2Q8IVF5 1701 aa9.27□□□□□ -0.93
LRRC28-211ENST00000558890 RFX7Q2KHR2 1363 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 ERC2O15083 957 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 TOMM70O94826 608 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 EGFRP00533 1210 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 IFIT2P09913 472 aaKnown RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 SDSP20132 328 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 GYG1P46976 350 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 KCNJ4P48050 445 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 BCAMP50895 628 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 ZNF280AP59817 542 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
LRRC28-211ENST00000558890 CCDC158Q5M9N0 1113 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 STRIP1Q5VSL9 837 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 ZNF804AQ7Z570 1209 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 CERS5Q8N5B7 392 aa9.26□□□□□ -0.93
LRRC28-211ENST00000558890 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms