RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 BCORL1Q5H9F3 1711 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 DUOX2Q9NRD8 1548 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 TERTO14746 1132 aaKnown RBP8.97□□□□□ -0.97
LRRC28-209ENST00000558861 VSIG8P0DPA2 414 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 IRS1P35568 1242 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 OR13H1Q8NG92 308 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 ANKRD30AQ9BXX3 1397 aa8.97□□□□□ -0.97
LRRC28-209ENST00000558861 MAP3K6O95382 1288 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 CES1P23141 567 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 ZNF468Q5VIY5 522 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-209ENST00000558861 ALG1LQ6GMV1 187 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 PI16Q6UXB8 463 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-209ENST00000558861 ADAMTSL3P82987 1691 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 NAIPQ13075 1403 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
LRRC28-209ENST00000558861 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 PCBP4P57723 403 aaKnown RBP8.95□□□□□ -0.98
LRRC28-209ENST00000558861 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 DHX32Q7L7V1 743 aaKnown RBP8.95□□□□□ -0.98
LRRC28-209ENST00000558861 EPS8L3Q8TE67 593 aaKnown RBP8.95□□□□□ -0.98
LRRC28-209ENST00000558861 CCDC74AQ96AQ1 378 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 COL25A1Q9BXS0 654 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-209ENST00000558861 EFCC1Q9HA90 598 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 NPHS2Q9NP85 383 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 RRP7BPQ9NSQ0 103 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 TLR7Q9NYK1 1049 aaKnown RBP8.95□□□□□ -0.98
LRRC28-209ENST00000558861 PARP2Q9UGN5 583 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 HFM1A2PYH4 1435 aa8.95□□□□□ -0.98
LRRC28-209ENST00000558861 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 PSAPP07602 524 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 COL13A1Q5TAT6 717 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-209ENST00000558861 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 MRRFQ96E11 262 aaKnown RBP8.94□□□□□ -0.98
LRRC28-209ENST00000558861 NSUN5Q96P11 429 aaKnown RBP8.94□□□□□ -0.98
LRRC28-209ENST00000558861 IGFLR1Q9H665 355 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 LATS2Q9NRM7 1088 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 MBIPQ9NS73 344 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
LRRC28-209ENST00000558861 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
LRRC28-209ENST00000558861 SOX18P35713 384 aa8.93□□□□□ -0.98
LRRC28-209ENST00000558861 MLLT1Q03111 559 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-209ENST00000558861 PLAURQ03405 335 aa8.93□□□□□ -0.98
LRRC28-209ENST00000558861 TBC1D8BQ0IIM8 1120 aa8.93□□□□□ -0.98
LRRC28-209ENST00000558861 NFX1Q12986 1120 aaKnown RBP8.93□□□□□ -0.98
LRRC28-209ENST00000558861 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
LRRC28-209ENST00000558861 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
LRRC28-209ENST00000558861 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
LRRC28-209ENST00000558861 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
LRRC28-209ENST00000558861 DEPDC5O75140 1603 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 KDM5DQ9BY66 1539 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 FGD1P98174 961 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 KRT76Q01546 638 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 XPCQ01831 940 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-209ENST00000558861 GALNT12Q8IXK2 581 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
LRRC28-209ENST00000558861 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-209ENST00000558861 KIF3BO15066 747 aa8.91□□□□□ -0.98
LRRC28-209ENST00000558861 HOXD8P13378 290 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-209ENST00000558861 ACPPP15309 386 aa8.91□□□□□ -0.98
LRRC28-209ENST00000558861 ITGAEP38570 1179 aa8.91□□□□□ -0.98
LRRC28-209ENST00000558861 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
LRRC28-209ENST00000558861 DNAJB12Q9NXW2 375 aaKnown RBP8.91□□□□□ -0.98
LRRC28-209ENST00000558861 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
LRRC28-209ENST00000558861 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-209ENST00000558861 ZBTB42B2RXF5 422 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 E9PSI1 815 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 SIN3BO75182 1162 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 KIF4AO95239 1232 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 ARAFP10398 606 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 GNA15P30679 374 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 NRLP54845 237 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 GPLD1P80108 840 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 DAB2P98082 770 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 HYAL2Q12891 473 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 PSMD2Q13200 908 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 PEAR1Q5VY43 1037 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-209ENST00000558861 HFE2Q6ZVN8 426 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 NCAPG2Q86XI2 1143 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 IRF7Q92985 503 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 SALL4Q9UJQ4 1053 aa8.9□□□□□ -0.98
LRRC28-209ENST00000558861 NSFL1CQ9UNZ2 370 aaKnown RBP8.9□□□□□ -0.98
LRRC28-209ENST00000558861 NEURL1BA8MQ27 555 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 EDN3P14138 238 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 ADH6P28332 368 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 MAP2K3P46734 347 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 MRPL58Q14197 206 aaKnown RBP8.89□□□□□ -0.99
LRRC28-209ENST00000558861 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 FCHSD1Q86WN1 690 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 TRPM4Q8TD43 1214 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-209ENST00000558861 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 ABCC3O15438 1527 aa8.89□□□□□ -0.99
LRRC28-209ENST00000558861 LMTK2Q8IWU2 1503 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms