RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 FRAT2O75474 233 aaPredicted RBP15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 ZNF157P51786 506 aaPredicted RBP15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 LBX1P52954 281 aa15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 CERS5Q8N5B7 392 aa15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 FAM84BQ96KN1 310 aaPredicted RBP15.48■□□□□ 0.07
CDC42BPB-202ENST00000558321 PDE8BO95263 885 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 RBM5P52756 815 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 FKBP1AP62942 108 aaKnown RBP15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 PRAMEF18Q5VWM3 479 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 PSME4Q14997 1843 aa15.47■□□□□ 0.07
CDC42BPB-202ENST00000558321 PCNTO95613 3336 aa15.46■□□□□ 0.07
CDC42BPB-202ENST00000558321 NF2P35240 595 aa15.46■□□□□ 0.07
CDC42BPB-202ENST00000558321 NOGQ13253 232 aa15.46■□□□□ 0.07
CDC42BPB-202ENST00000558321 TTLL12Q14166 644 aaPredicted RBP15.46■□□□□ 0.07
CDC42BPB-202ENST00000558321 APOBEC3FQ8IUX4 373 aaKnown RBP15.46■□□□□ 0.07
CDC42BPB-202ENST00000558321 POLR2AP24928 1970 aaKnown RBP15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 FAM205AQ6ZU69 1335 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 EYA2O00167 538 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 MYO1BO43795 1136 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 FKBP1BP68106 108 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 CFAP100Q494V2 611 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 MFSD14BQ5SR56 506 aa15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 IQSEC3Q9UPP2 1182 aaPredicted RBP15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 LRRFIP2Q9Y608 721 aaKnown RBP15.45■□□□□ 0.06
CDC42BPB-202ENST00000558321 UBE2Q2LH0YL09 131 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 BCAR3O75815 825 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 GNAI3P08754 354 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 PUM3Q15397 648 aaKnown RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 MEIS3Q99687 375 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 SIL1Q9H173 461 aa15.44■□□□□ 0.06
CDC42BPB-202ENST00000558321 BCAMP50895 628 aa15.43■□□□□ 0.06
CDC42BPB-202ENST00000558321 VGLL2Q8N8G2 317 aa15.43■□□□□ 0.06
CDC42BPB-202ENST00000558321 MTMR14Q8NCE2 650 aa15.43■□□□□ 0.06
CDC42BPB-202ENST00000558321 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
CDC42BPB-202ENST00000558321 TTF2Q9UNY4 1162 aaKnown RBP15.43■□□□□ 0.06
CDC42BPB-202ENST00000558321 CLRN2A0PK11 232 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 CA12O43570 354 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 CAPN15O75808 1086 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 SLC5A1P13866 664 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 PRKG1Q13976 671 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 ATF7IPQ6VMQ6 1270 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 MOB2Q70IA6 237 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 PRMT6Q96LA8 375 aaPredicted RBP15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 DEFB129Q9H1M3 183 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 TSKSQ9UJT2 592 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 PCDHAC2Q9Y5I4 1007 aa15.42■□□□□ 0.06
CDC42BPB-202ENST00000558321 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 FAM155AB1AL88 458 aaPredicted RBP15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 ARMC9Q7Z3E5 817 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 LPIN2Q92539 896 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
CDC42BPB-202ENST00000558321 A0A1B0GUL6 1792 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 CIAO1O76071 339 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 SLC10A3P09131 477 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 TRIM27P14373 513 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 FGFR2P21802 821 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 ATG9AQ7Z3C6 839 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 SERPINA10Q9UK55 444 aa15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 PA2G4Q9UQ80 394 aaKnown RBP15.4■□□□□ 0.06
CDC42BPB-202ENST00000558321 IL15P40933 162 aaPredicted RBP15.39■□□□□ 0.05
CDC42BPB-202ENST00000558321 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
CDC42BPB-202ENST00000558321 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
CDC42BPB-202ENST00000558321 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
CDC42BPB-202ENST00000558321 TNNQ9UQP3 1299 aa15.39■□□□□ 0.05
CDC42BPB-202ENST00000558321 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 GNAI2P04899 355 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 CRKP46108 304 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 SUPT20HL1Q3ZLR7 823 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 RASAL3Q86YV0 1011 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 TDRD3Q9H7E2 651 aaKnown RBP15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 ANGEL1Q9UNK9 670 aaKnown RBP15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 PPP2R3BQ9Y5P8 575 aa15.38■□□□□ 0.05
CDC42BPB-202ENST00000558321 THSD7BQ9C0I4 1608 aa15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 PPP1R12BO60237 982 aaPredicted RBP15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 TNFAIP1Q13829 316 aa15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 RASA3Q14644 834 aa15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 GRIK5Q16478 980 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms