RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CASP8AP2Q9UKL3 1982 aa17.15■□□□□ 0.34
SNRPA1-204ENST00000558020 ZBED3Q96IU2 234 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-204ENST00000558020 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 HIBADHP31937 336 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 SUPT20HL1Q3ZLR7 823 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 PPP2R3BQ9Y5P8 575 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 UTYO14607 1347 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
SNRPA1-204ENST00000558020 F8W031 263 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 PPP1R12BO60237 982 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 CERS5Q8N5B7 392 aa17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
SNRPA1-204ENST00000558020 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
SNRPA1-204ENST00000558020 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
SNRPA1-204ENST00000558020 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
SNRPA1-204ENST00000558020 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-204ENST00000558020 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 UNCXA6NJT0 531 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 TM4SF4P48230 202 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 PRKG1Q13976 671 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 BICC1Q9H694 974 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 ANGEL1Q9UNK9 670 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
SNRPA1-204ENST00000558020 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 GYG1P46976 350 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 INHBEP58166 350 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 ALDH1L2Q3SY69 923 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 ZNF646O15015 1829 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-204ENST00000558020 PUS3Q9BZE2 481 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 VEZTQ9HBM0 779 aa17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
SNRPA1-204ENST00000558020 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 PDE8BO95263 885 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 RGS19P49795 217 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 CTU1Q7Z7A3 348 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 TBC1D22AQ8WUA7 517 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
SNRPA1-204ENST00000558020 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 IREB2P48200 963 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 MKRN3Q13064 507 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 PKN2Q16513 984 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 SMC4Q9NTJ3 1288 aa17.06■□□□□ 0.32
SNRPA1-204ENST00000558020 MANSC4A6NHS7 340 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 TNNI2P48788 182 aa17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 RASA3Q14644 834 aa17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
SNRPA1-204ENST00000558020 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-204ENST00000558020 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-204ENST00000558020 LRRC24Q50LG9 513 aa17.04■□□□□ 0.32
SNRPA1-204ENST00000558020 PCDHAC2Q9Y5I4 1007 aa17.04■□□□□ 0.32
SNRPA1-204ENST00000558020 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
SNRPA1-204ENST00000558020 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-204ENST00000558020 GPR25O00155 361 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 CRKP46108 304 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 CHAF1AQ13111 956 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 ANKRD13AQ8IZ07 590 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 CFHR5Q9BXR6 569 aa17.02■□□□□ 0.32
SNRPA1-204ENST00000558020 TDRD3Q9H7E2 651 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms