RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 WBP1LQ9NX94 342 aa20.9■□□□□ 0.94
NEDD4-212ENST00000557845 EYA2O00167 538 aa20.89■□□□□ 0.93
NEDD4-212ENST00000557845 TRIM27P14373 513 aa20.89■□□□□ 0.93
NEDD4-212ENST00000557845 COL13A1Q5TAT6 717 aaPredicted RBP20.89■□□□□ 0.93
NEDD4-212ENST00000557845 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
NEDD4-212ENST00000557845 MEIS3Q99687 375 aa20.89■□□□□ 0.93
NEDD4-212ENST00000557845 SCAF8Q9UPN6 1271 aaKnown RBP20.89■□□□□ 0.93
NEDD4-212ENST00000557845 JAG2Q9Y219 1238 aa20.89■□□□□ 0.93
NEDD4-212ENST00000557845 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.93
NEDD4-212ENST00000557845 FAM205AQ6ZU69 1335 aa20.88■□□□□ 0.93
NEDD4-212ENST00000557845 HUNKP57058 714 aa20.88■□□□□ 0.93
NEDD4-212ENST00000557845 MAP2K1Q02750 393 aaPredicted RBP20.88■□□□□ 0.93
NEDD4-212ENST00000557845 FBXO33Q7Z6M2 555 aa20.88■□□□□ 0.93
NEDD4-212ENST00000557845 ZBED3Q96IU2 234 aaPredicted RBP20.88■□□□□ 0.93
NEDD4-212ENST00000557845 F8W031 263 aaPredicted RBP20.87■□□□□ 0.93
NEDD4-212ENST00000557845 FOXN1O15353 648 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 MAP2K2P36507 400 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 CAVIN4Q5BKX8 364 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 VPS37DQ86XT2 251 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 AIDAQ96BJ3 306 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
NEDD4-212ENST00000557845 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 AOC2O75106 756 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 GNAI3P08754 354 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 DLGAP5Q15398 846 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 ATG9AQ7Z3C6 839 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 MTMR14Q8NCE2 650 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 FBXO3Q9UK99 471 aa20.86■□□□□ 0.93
NEDD4-212ENST00000557845 FGFR2P21802 821 aa20.85■□□□□ 0.93
NEDD4-212ENST00000557845 PUM3Q15397 648 aaKnown RBP20.85■□□□□ 0.93
NEDD4-212ENST00000557845 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
NEDD4-212ENST00000557845 PRAMEF18Q5VWM3 479 aa20.85■□□□□ 0.93
NEDD4-212ENST00000557845 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
NEDD4-212ENST00000557845 CIAO1O76071 339 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 IFIT1P09914 478 aaKnown RBP20.84■□□□□ 0.93
NEDD4-212ENST00000557845 BCAMP50895 628 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 MFSD14BQ5SR56 506 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 ZKSCAN2Q63HK3 967 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 RGMBQ6NW40 437 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 SIL1Q9H173 461 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 IQSEC3Q9UPP2 1182 aaPredicted RBP20.84■□□□□ 0.93
NEDD4-212ENST00000557845 THSD7BQ9C0I4 1608 aa20.84■□□□□ 0.93
NEDD4-212ENST00000557845 CTCFP49711 727 aaPredicted RBP20.83■□□□□ 0.93
NEDD4-212ENST00000557845 CFAP100Q494V2 611 aa20.83■□□□□ 0.93
NEDD4-212ENST00000557845 PRMT6Q96LA8 375 aaPredicted RBP20.83■□□□□ 0.93
NEDD4-212ENST00000557845 PCDHAC2Q9Y5I4 1007 aa20.83■□□□□ 0.93
NEDD4-212ENST00000557845 FRAT2O75474 233 aaPredicted RBP20.82■□□□□ 0.92
NEDD4-212ENST00000557845 FKBP1BP68106 108 aa20.82■□□□□ 0.92
NEDD4-212ENST00000557845 APOBEC3FQ8IUX4 373 aaKnown RBP20.82■□□□□ 0.92
NEDD4-212ENST00000557845 LPIN2Q92539 896 aa20.82■□□□□ 0.92
NEDD4-212ENST00000557845 COPRSQ9NQ92 184 aa20.82■□□□□ 0.92
NEDD4-212ENST00000557845 CEP126Q9P2H0 1117 aa20.82■□□□□ 0.92
NEDD4-212ENST00000557845 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
NEDD4-212ENST00000557845 ECM29Q5VYK3 1845 aa20.81■□□□□ 0.92
NEDD4-212ENST00000557845 SLC5A1P13866 664 aa20.81■□□□□ 0.92
NEDD4-212ENST00000557845 IL15P40933 162 aaPredicted RBP20.81■□□□□ 0.92
NEDD4-212ENST00000557845 ZNF157P51786 506 aaPredicted RBP20.81■□□□□ 0.92
NEDD4-212ENST00000557845 CCDC102AQ96A19 550 aa20.81■□□□□ 0.92
NEDD4-212ENST00000557845 BEGAINQ9BUH8 593 aa20.81■□□□□ 0.92
NEDD4-212ENST00000557845 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
NEDD4-212ENST00000557845 SPDYE2BA6NHP3 402 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 FAM155AB1AL88 458 aaPredicted RBP20.8■□□□□ 0.92
NEDD4-212ENST00000557845 SRGAP3O43295 1099 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 MYO1BO43795 1136 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 SPDYE6P0CI01 402 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 RBM5P52756 815 aaKnown RBP eCLIP20.8■□□□□ 0.92
NEDD4-212ENST00000557845 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
NEDD4-212ENST00000557845 NOGQ13253 232 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
NEDD4-212ENST00000557845 GNAI2P04899 355 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 LBX1P52954 281 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 MTX1Q13505 466 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 MOB2Q70IA6 237 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 TBC1D22AQ8WUA7 517 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 ZIC5Q96T25 663 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 SERPINA10Q9UK55 444 aa20.79■□□□□ 0.92
NEDD4-212ENST00000557845 PAPPA2Q9BXP8 1791 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 NF2P35240 595 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 GRIK5Q16478 980 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 ATP2B3Q16720 1220 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 DEFB129Q9H1M3 183 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
NEDD4-212ENST00000557845 CLRN2A0PK11 232 aa20.77■□□□□ 0.92
NEDD4-212ENST00000557845 HSPA8P11142 646 aaKnown RBP20.77■□□□□ 0.92
NEDD4-212ENST00000557845 AOX1Q06278 1338 aa20.77■□□□□ 0.91
NEDD4-212ENST00000557845 UBE2Q2LH0YL09 131 aa20.76■□□□□ 0.91
NEDD4-212ENST00000557845 TTLL12Q14166 644 aaPredicted RBP20.76■□□□□ 0.91
NEDD4-212ENST00000557845 TNS4Q8IZW8 715 aa20.76■□□□□ 0.91
NEDD4-212ENST00000557845 MYH13Q9UKX3 1938 aa20.75■□□□□ 0.91
NEDD4-212ENST00000557845 SLC10A3P09131 477 aa20.75■□□□□ 0.91
NEDD4-212ENST00000557845 CRKP46108 304 aa20.75■□□□□ 0.91
NEDD4-212ENST00000557845 DZIP1LQ8IYY4 767 aaKnown RBP20.75■□□□□ 0.91
NEDD4-212ENST00000557845 VEZTQ9HBM0 779 aa20.75■□□□□ 0.91
NEDD4-212ENST00000557845 PPP2R3BQ9Y5P8 575 aa20.75■□□□□ 0.91
NEDD4-212ENST00000557845 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
NEDD4-212ENST00000557845 HDLBPQ00341 1268 aaKnown RBP20.74■□□□□ 0.91
NEDD4-212ENST00000557845 KIF23Q02241 960 aaPredicted RBP20.74■□□□□ 0.91
NEDD4-212ENST00000557845 FTSJ3Q8IY81 847 aaKnown RBP20.74■□□□□ 0.91
NEDD4-212ENST00000557845 MRIQ9BWK5 157 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms