RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
SCFD1-224ENST00000557713 ZNF296Q8WUU4 475 aaPredicted RBP20.24■□□□□ 0.83
SCFD1-224ENST00000557713 PCDHAC2Q9Y5I4 1007 aa20.24■□□□□ 0.83
SCFD1-224ENST00000557713 COL1A1P02452 1464 aaPredicted RBP20.24■□□□□ 0.83
SCFD1-224ENST00000557713 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
SCFD1-224ENST00000557713 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
SCFD1-224ENST00000557713 MKRN3Q13064 507 aaKnown RBP20.23■□□□□ 0.83
SCFD1-224ENST00000557713 MAP3K11Q16584 847 aa20.22■□□□□ 0.83
SCFD1-224ENST00000557713 CFAP100Q494V2 611 aa20.22■□□□□ 0.83
SCFD1-224ENST00000557713 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
SCFD1-224ENST00000557713 SPRYD7Q5W111 196 aa20.22■□□□□ 0.83
SCFD1-224ENST00000557713 PRMT6Q96LA8 375 aaPredicted RBP20.22■□□□□ 0.83
SCFD1-224ENST00000557713 C9orf78Q9NZ63 289 aaPredicted RBP20.22■□□□□ 0.83
SCFD1-224ENST00000557713 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
SCFD1-224ENST00000557713 FZD1Q9UP38 647 aa20.22■□□□□ 0.83
SCFD1-224ENST00000557713 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
SCFD1-224ENST00000557713 SPDYE2BA6NHP3 402 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
SCFD1-224ENST00000557713 PLIN1O60240 522 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 SPDYE6P0CI01 402 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 SREBF2Q12772 1141 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 PPP2R3BQ9Y5P8 575 aa20.21■□□□□ 0.83
SCFD1-224ENST00000557713 GPR25O00155 361 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 SOX10P56693 466 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
SCFD1-224ENST00000557713 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 KAZALD1Q96I82 304 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 JAG2Q9Y219 1238 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 FAM205AQ6ZU69 1335 aa20.2■□□□□ 0.82
SCFD1-224ENST00000557713 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
SCFD1-224ENST00000557713 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
SCFD1-224ENST00000557713 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 R3HDMLQ9H3Y0 253 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 HPS5Q9UPZ3 1129 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 SSC5DA1L4H1 1573 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 AOX1Q06278 1338 aa20.19■□□□□ 0.82
SCFD1-224ENST00000557713 CLRN2A0PK11 232 aa20.18■□□□□ 0.82
SCFD1-224ENST00000557713 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
SCFD1-224ENST00000557713 MYO1BO43795 1136 aa20.18■□□□□ 0.82
SCFD1-224ENST00000557713 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
SCFD1-224ENST00000557713 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
SCFD1-224ENST00000557713 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
SCFD1-224ENST00000557713 PPP1R12BO60237 982 aaPredicted RBP20.17■□□□□ 0.82
SCFD1-224ENST00000557713 SLC34A2O95436 690 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 NBPF7P0C2Y1 421 aaPredicted RBP20.17■□□□□ 0.82
SCFD1-224ENST00000557713 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
SCFD1-224ENST00000557713 INHBEP58166 350 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 SUPT20HL1Q3ZLR7 823 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 NBPF12Q5TAG4 269 aaPredicted RBP20.17■□□□□ 0.82
SCFD1-224ENST00000557713 CLMNQ96JQ2 1002 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
SCFD1-224ENST00000557713 ECM29Q5VYK3 1845 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 UTYO14607 1347 aa20.17■□□□□ 0.82
SCFD1-224ENST00000557713 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
SCFD1-224ENST00000557713 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
SCFD1-224ENST00000557713 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
SCFD1-224ENST00000557713 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
SCFD1-224ENST00000557713 RIPOR2Q9Y4F9 1068 aa20.16■□□□□ 0.82
SCFD1-224ENST00000557713 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
SCFD1-224ENST00000557713 FKTNO75072 461 aa20.15■□□□□ 0.82
SCFD1-224ENST00000557713 USP2O75604 605 aaPredicted RBP20.15■□□□□ 0.82
SCFD1-224ENST00000557713 ALDH1A1P00352 501 aa20.15■□□□□ 0.82
SCFD1-224ENST00000557713 GYG1P46976 350 aa20.15■□□□□ 0.82
SCFD1-224ENST00000557713 RBM5P52756 815 aaKnown RBP eCLIP20.15■□□□□ 0.82
SCFD1-224ENST00000557713 RASA3Q14644 834 aa20.15■□□□□ 0.82
SCFD1-224ENST00000557713 WNK4Q96J92 1243 aa20.15■□□□□ 0.82
SCFD1-224ENST00000557713 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
SCFD1-224ENST00000557713 IFNL1Q8IU54 200 aa20.14■□□□□ 0.81
SCFD1-224ENST00000557713 SERPINA10Q9UK55 444 aa20.14■□□□□ 0.81
SCFD1-224ENST00000557713 RABL6Q3YEC7 729 aaPredicted RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 SPDYE2Q495Y8 402 aa20.13■□□□□ 0.81
SCFD1-224ENST00000557713 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 MRPL50Q8N5N7 158 aaKnown RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 ZNF70Q9UC06 446 aaPredicted RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
SCFD1-224ENST00000557713 MROH5Q6ZUA9 1318 aa20.12■□□□□ 0.81
SCFD1-224ENST00000557713 IGF2BP3O00425 579 aaKnown RBP eCLIP20.12■□□□□ 0.81
SCFD1-224ENST00000557713 FBXO33Q7Z6M2 555 aa20.12■□□□□ 0.81
SCFD1-224ENST00000557713 BICC1Q9H694 974 aaKnown RBP20.12■□□□□ 0.81
SCFD1-224ENST00000557713 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
SCFD1-224ENST00000557713 ANKRD44Q8N8A2 993 aa20.11■□□□□ 0.81
SCFD1-224ENST00000557713 TDRD3Q9H7E2 651 aaKnown RBP20.11■□□□□ 0.81
SCFD1-224ENST00000557713 GJA5P36382 358 aa20.1■□□□□ 0.81
SCFD1-224ENST00000557713 LRRC24Q50LG9 513 aa20.1■□□□□ 0.81
SCFD1-224ENST00000557713 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
SCFD1-224ENST00000557713 ANKRD13AQ8IZ07 590 aa20.1■□□□□ 0.81
SCFD1-224ENST00000557713 TEPSINQ96N21 525 aa20.1■□□□□ 0.81
SCFD1-224ENST00000557713 LAMB1P07942 1786 aa20.1■□□□□ 0.81
SCFD1-224ENST00000557713 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
SCFD1-224ENST00000557713 GRIK5Q16478 980 aa20.09■□□□□ 0.81
SCFD1-224ENST00000557713 TESPA1A2RU30 521 aaPredicted RBP20.08■□□□□ 0.81
SCFD1-224ENST00000557713 PDE8BO95263 885 aa20.08■□□□□ 0.81
SCFD1-224ENST00000557713 CRKP46108 304 aa20.08■□□□□ 0.81
SCFD1-224ENST00000557713 VGLL2Q8N8G2 317 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms