RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 DBNLQ9UJU6 430 aaKnown RBP18.28■□□□□ 0.52
VIPAS39-210ENST00000557466 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 RPS12P25398 132 aaKnown RBP18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 EPS15P42566 896 aa18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 CHAF1AQ13111 956 aaPredicted RBP18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 AACSQ86V21 672 aa18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 CERS5Q8N5B7 392 aa18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 GMLQ99445 158 aa18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 LRRCC1Q9C099 1032 aa18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 CCDC8Q9H0W5 538 aaPredicted RBP18.27■□□□□ 0.52
VIPAS39-210ENST00000557466 MYO3BQ8WXR4 1341 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 IQCA1LA6NCM1 817 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 SMARCA5O60264 1052 aaPredicted RBP18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 GORABQ5T7V8 394 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 DPF2Q92785 391 aa18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
VIPAS39-210ENST00000557466 EPHX2P34913 555 aa18.25■□□□□ 0.51
VIPAS39-210ENST00000557466 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
VIPAS39-210ENST00000557466 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
VIPAS39-210ENST00000557466 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
VIPAS39-210ENST00000557466 ECM29Q5VYK3 1845 aa18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 SEMA3EO15041 775 aa18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 ZBTB22O15209 634 aa18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 IGHDP01880 384 aa18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 FKBP1AP62942 108 aaKnown RBP18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 CNOT7Q9UIV1 285 aaKnown RBP18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 MYO5AQ9Y4I1 1855 aaKnown RBP18.24■□□□□ 0.51
VIPAS39-210ENST00000557466 MAST2Q6P0Q8 1798 aa18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 SCARF1Q14162 830 aa18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
VIPAS39-210ENST00000557466 DOCK2Q92608 1830 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 GRIK5Q16478 980 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 ADARB2Q9NS39 739 aaKnown RBP18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 PDS5AQ29RF7 1337 aaKnown RBP18.22■□□□□ 0.51
VIPAS39-210ENST00000557466 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 H7C1D1 291 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 POTEIP0CG38 1075 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 POTEJP0CG39 1038 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 MCAMP43121 646 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 ZNF280AP59817 542 aaPredicted RBP18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 SAMD7Q7Z3H4 446 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
VIPAS39-210ENST00000557466 EGFRP00533 1210 aa18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 SMC5Q8IY18 1101 aa18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
VIPAS39-210ENST00000557466 NEFLP07196 543 aa18.19■□□□□ 0.5
VIPAS39-210ENST00000557466 KIF4BQ2VIQ3 1234 aa18.19■□□□□ 0.5
VIPAS39-210ENST00000557466 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
VIPAS39-210ENST00000557466 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
VIPAS39-210ENST00000557466 MYH2Q9UKX2 1941 aa18.19■□□□□ 0.5
VIPAS39-210ENST00000557466 HIRAP54198 1017 aaPredicted RBP18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 RBM26Q5T8P6 1007 aaKnown RBP18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 MYOZ2Q9NPC6 264 aa18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 TTF2Q9UNY4 1162 aaKnown RBP18.18■□□□□ 0.5
VIPAS39-210ENST00000557466 TOMM70O94826 608 aa18.17■□□□□ 0.5
VIPAS39-210ENST00000557466 PRDX5P30044 214 aa18.17■□□□□ 0.5
VIPAS39-210ENST00000557466 LDHDQ86WU2 507 aa18.17■□□□□ 0.5
VIPAS39-210ENST00000557466 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
VIPAS39-210ENST00000557466 POLR2AP24928 1970 aaKnown RBP18.17■□□□□ 0.5
VIPAS39-210ENST00000557466 ZAP70P43403 619 aa18.16■□□□□ 0.5
VIPAS39-210ENST00000557466 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
VIPAS39-210ENST00000557466 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
VIPAS39-210ENST00000557466 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
VIPAS39-210ENST00000557466 MYH7P12883 1935 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 MMP14P50281 582 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 ZGPATQ8N5A5 531 aaKnown RBP18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 ABCF2Q9UG63 623 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 NDUFB9Q9Y6M9 179 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 MAST3O60307 1309 aa18.15■□□□□ 0.5
VIPAS39-210ENST00000557466 ASTN2O75129 1339 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms