RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SCN4AP35499 1836 aa25.77■■□□□ 1.72
SEC23A-213ENST00000557280 CHAF1AQ13111 956 aaPredicted RBP25.76■■□□□ 1.71
SEC23A-213ENST00000557280 HDAC1Q13547 482 aaPredicted RBP25.76■■□□□ 1.71
SEC23A-213ENST00000557280 AACSQ86V21 672 aa25.76■■□□□ 1.71
SEC23A-213ENST00000557280 HACL1Q9UJ83 578 aa25.76■■□□□ 1.71
SEC23A-213ENST00000557280 FAM205AQ6ZU69 1335 aa25.76■■□□□ 1.71
SEC23A-213ENST00000557280 VEGFAP15692 232 aaPredicted RBP25.75■■□□□ 1.71
SEC23A-213ENST00000557280 MICALL2Q8IY33 904 aa25.75■■□□□ 1.71
SEC23A-213ENST00000557280 TAF1DQ9H5J8 278 aaPredicted RBP25.75■■□□□ 1.71
SEC23A-213ENST00000557280 IGHDP01880 384 aa25.74■■□□□ 1.71
SEC23A-213ENST00000557280 RPS12P25398 132 aaKnown RBP25.74■■□□□ 1.71
SEC23A-213ENST00000557280 RASGRF1Q13972 1273 aa25.74■■□□□ 1.71
SEC23A-213ENST00000557280 MYH13Q9UKX3 1938 aa25.74■■□□□ 1.71
SEC23A-213ENST00000557280 IQCA1LA6NCM1 817 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 FRAT2O75474 233 aaPredicted RBP25.73■■□□□ 1.71
SEC23A-213ENST00000557280 POTEIP0CG38 1075 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 POTEJP0CG39 1038 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 LMOD1P29536 600 aaPredicted RBP25.73■■□□□ 1.71
SEC23A-213ENST00000557280 EPHX2P34913 555 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 GRIK5Q16478 980 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 AGBL3Q8NEM8 1001 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 DPF2Q92785 391 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 LRRCC1Q9C099 1032 aa25.73■■□□□ 1.71
SEC23A-213ENST00000557280 CNOT7Q9UIV1 285 aaKnown RBP25.73■■□□□ 1.71
SEC23A-213ENST00000557280 EGFRP00533 1210 aa25.72■■□□□ 1.71
SEC23A-213ENST00000557280 SCARF1Q14162 830 aa25.72■■□□□ 1.71
SEC23A-213ENST00000557280 GORABQ5T7V8 394 aa25.72■■□□□ 1.71
SEC23A-213ENST00000557280 PI16Q6UXB8 463 aa25.72■■□□□ 1.71
SEC23A-213ENST00000557280 TRPM4Q8TD43 1214 aa25.72■■□□□ 1.71
SEC23A-213ENST00000557280 ARID4AP29374 1257 aaPredicted RBP25.71■■□□□ 1.71
SEC23A-213ENST00000557280 MFSD14BQ5SR56 506 aa25.71■■□□□ 1.71
SEC23A-213ENST00000557280 KIAA0825Q8IV33 1275 aa25.71■■□□□ 1.71
SEC23A-213ENST00000557280 CLASRPQ8N2M8 674 aaKnown RBP25.71■■□□□ 1.71
SEC23A-213ENST00000557280 GNL3LQ9NVN8 582 aaKnown RBP25.71■■□□□ 1.71
SEC23A-213ENST00000557280 ADAMTSL1Q8N6G6 1762 aa25.69■■□□□ 1.7
SEC23A-213ENST00000557280 MYO3BQ8WXR4 1341 aa25.69■■□□□ 1.7
SEC23A-213ENST00000557280 F8W031 263 aaPredicted RBP25.69■■□□□ 1.7
SEC23A-213ENST00000557280 FKBP1AP62942 108 aaKnown RBP25.69■■□□□ 1.7
SEC23A-213ENST00000557280 SAMD7Q7Z3H4 446 aa25.69■■□□□ 1.7
SEC23A-213ENST00000557280 USP17L8P0C7I0 530 aa25.68■■□□□ 1.7
SEC23A-213ENST00000557280 MCAMP43121 646 aa25.68■■□□□ 1.7
SEC23A-213ENST00000557280 ZNF280AP59817 542 aaPredicted RBP25.68■■□□□ 1.7
SEC23A-213ENST00000557280 EAPPQ56P03 285 aaPredicted RBP25.68■■□□□ 1.7
SEC23A-213ENST00000557280 ADARB2Q9NS39 739 aaKnown RBP25.68■■□□□ 1.7
SEC23A-213ENST00000557280 HMG20BQ9P0W2 317 aa25.68■■□□□ 1.7
SEC23A-213ENST00000557280 DENND2AQ9ULE3 1009 aa25.68■■□□□ 1.7
SEC23A-213ENST00000557280 SEMA3EO15041 775 aa25.67■■□□□ 1.7
SEC23A-213ENST00000557280 HIRAP54198 1017 aaPredicted RBP25.67■■□□□ 1.7
SEC23A-213ENST00000557280 TBC1D10BQ4KMP7 808 aaPredicted RBP25.67■■□□□ 1.7
SEC23A-213ENST00000557280 TTC39AQ5SRH9 613 aa25.67■■□□□ 1.7
SEC23A-213ENST00000557280 RWDD1Q9H446 243 aaPredicted RBP25.67■■□□□ 1.7
SEC23A-213ENST00000557280 ZBTB22O15209 634 aa25.66■■□□□ 1.7
SEC23A-213ENST00000557280 IFIT2P09913 472 aaKnown RBP25.66■■□□□ 1.7
SEC23A-213ENST00000557280 CCDC158Q5M9N0 1113 aa25.66■■□□□ 1.7
SEC23A-213ENST00000557280 H7C1D1 291 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 RBM26Q5T8P6 1007 aaKnown RBP25.65■■□□□ 1.7
SEC23A-213ENST00000557280 SMC5Q8IY18 1101 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 SPATA5Q8NB90 893 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 GCC1Q96CN9 775 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 SNRKQ9NRH2 765 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 PCDHAC2Q9Y5I4 1007 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 AKAP11Q9UKA4 1901 aa25.65■■□□□ 1.7
SEC23A-213ENST00000557280 PDS5AQ29RF7 1337 aaKnown RBP25.64■■□□□ 1.7
SEC23A-213ENST00000557280 UQCRFS1P1P0C7P4 283 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 KIF4BQ2VIQ3 1234 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 WDR66Q8TBY9 1149 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 OTUD7AQ8TE49 926 aaPredicted RBP25.64■■□□□ 1.7
SEC23A-213ENST00000557280 TBC1D22AQ8WUA7 517 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 MYOZ2Q9NPC6 264 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 NDUFB9Q9Y6M9 179 aa25.64■■□□□ 1.7
SEC23A-213ENST00000557280 ASTN2O75129 1339 aaPredicted RBP25.63■■□□□ 1.69
SEC23A-213ENST00000557280 PRDX5P30044 214 aa25.63■■□□□ 1.69
SEC23A-213ENST00000557280 USP50Q70EL3 339 aaPredicted RBP25.63■■□□□ 1.69
SEC23A-213ENST00000557280 C16orf71Q8IYS4 520 aaPredicted RBP25.63■■□□□ 1.69
SEC23A-213ENST00000557280 ZNF512BQ96KM6 892 aaPredicted RBP25.63■■□□□ 1.69
SEC23A-213ENST00000557280 SALL1Q9NSC2 1324 aa25.63■■□□□ 1.69
SEC23A-213ENST00000557280 ANKRD45Q5TZF3 282 aa25.62■■□□□ 1.69
SEC23A-213ENST00000557280 TBC1D9Q6ZT07 1266 aa25.62■■□□□ 1.69
SEC23A-213ENST00000557280 PNMA8AQ86V59 439 aaPredicted RBP25.62■■□□□ 1.69
SEC23A-213ENST00000557280 TTF2Q9UNY4 1162 aaKnown RBP25.62■■□□□ 1.69
SEC23A-213ENST00000557280 TSHZ3Q63HK5 1081 aa25.61■■□□□ 1.69
SEC23A-213ENST00000557280 B4GALNT3Q6L9W6 998 aa25.61■■□□□ 1.69
SEC23A-213ENST00000557280 OGFOD1Q8N543 542 aa25.61■■□□□ 1.69
SEC23A-213ENST00000557280 AOX1Q06278 1338 aa25.61■■□□□ 1.69
SEC23A-213ENST00000557280 TOMM70O94826 608 aa25.6■■□□□ 1.69
SEC23A-213ENST00000557280 ZAP70P43403 619 aa25.6■■□□□ 1.69
SEC23A-213ENST00000557280 LDHDQ86WU2 507 aa25.6■■□□□ 1.69
SEC23A-213ENST00000557280 ABCF2Q9UG63 623 aa25.59■■□□□ 1.69
SEC23A-213ENST00000557280 HDAC9Q9UKV0 1011 aa25.59■■□□□ 1.69
SEC23A-213ENST00000557280 CYP2E1P05181 493 aaPredicted RBP25.58■■□□□ 1.69
SEC23A-213ENST00000557280 NEFLP07196 543 aa25.58■■□□□ 1.69
SEC23A-213ENST00000557280 NBPF9Q3BBW0 867 aa25.58■■□□□ 1.69
SEC23A-213ENST00000557280 MAP1SQ66K74 1059 aaPredicted RBP25.58■■□□□ 1.69
SEC23A-213ENST00000557280 RBM46Q8TBY0 533 aaKnown RBP25.58■■□□□ 1.69
SEC23A-213ENST00000557280 ZBED3Q96IU2 234 aaPredicted RBP25.58■■□□□ 1.69
SEC23A-213ENST00000557280 CLEC11AQ9Y240 323 aa25.58■■□□□ 1.69
SEC23A-213ENST00000557280 WNT10BO00744 389 aa25.57■■□□□ 1.68
SEC23A-213ENST00000557280 DIXDC1Q155Q3 683 aa25.57■■□□□ 1.68
SEC23A-213ENST00000557280 CFAP100Q494V2 611 aa25.57■■□□□ 1.68
SEC23A-213ENST00000557280 PIH1D3Q9NQM4 214 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms