RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 APOBEC3FQ8IUX4 373 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-230ENST00000557201 MTMR14Q8NCE2 650 aa13.65□□□□□ -0.22
HNRNPC-230ENST00000557201 CFHR5Q9BXR6 569 aa13.65□□□□□ -0.22
HNRNPC-230ENST00000557201 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 A0A1B0GUL6 1792 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 F6X3S4 739 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 TAF5LO75529 589 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 TBC1D8O95759 1140 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 IL1R1P14778 569 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 NF2P35240 595 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 HDAC9Q9UKV0 1011 aa13.64□□□□□ -0.23
HNRNPC-230ENST00000557201 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 SOX10P56693 466 aa13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 MAP3K11Q16584 847 aa13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 PCDHAC2Q9Y5I4 1007 aa13.63□□□□□ -0.23
HNRNPC-230ENST00000557201 KCNJ4P48050 445 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 FKBP1AP62942 108 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 DEFB129Q9H1M3 183 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 R3HDMLQ9H3Y0 253 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 AOX1Q06278 1338 aa13.62□□□□□ -0.23
HNRNPC-230ENST00000557201 GPR25O00155 361 aa13.61□□□□□ -0.23
HNRNPC-230ENST00000557201 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-230ENST00000557201 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
HNRNPC-230ENST00000557201 LMBR1LQ6UX01 489 aa13.61□□□□□ -0.23
HNRNPC-230ENST00000557201 FZD1Q9UP38 647 aa13.61□□□□□ -0.23
HNRNPC-230ENST00000557201 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 GRM8O00222 908 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 SREBF2Q12772 1141 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 PRKG1Q13976 671 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 ZNF594Q96JF6 807 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 PRMT6Q96LA8 375 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
HNRNPC-230ENST00000557201 LAMB1P07942 1786 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 KAZALD1Q96I82 304 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 ECM29Q5VYK3 1845 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 FAM205AQ6ZU69 1335 aa13.59□□□□□ -0.23
HNRNPC-230ENST00000557201 UNCXA6NJT0 531 aa13.58□□□□□ -0.23
HNRNPC-230ENST00000557201 ALDH1L1O75891 902 aa13.58□□□□□ -0.23
HNRNPC-230ENST00000557201 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.23
HNRNPC-230ENST00000557201 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.23
HNRNPC-230ENST00000557201 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.23
HNRNPC-230ENST00000557201 MANSC4A6NHS7 340 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 F8W031 263 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 FKTNO75072 461 aa13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 ZBTB48P10074 688 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 TDRD7Q8NHU6 1098 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 JAG2Q9Y219 1238 aa13.58□□□□□ -0.24
HNRNPC-230ENST00000557201 CLRN2A0PK11 232 aa13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 IGF2BP3O00425 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 USP2O75604 605 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 ALDH1A1P00352 501 aa13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 INHBEP58166 350 aa13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 WNK4Q96J92 1243 aa13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 FAM84BQ96KN1 310 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-230ENST00000557201 HTTP42858 3142 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 UTYO14607 1347 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 MYO1BO43795 1136 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 GJA5P36382 358 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 SUCLG2Q96I99 432 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 CNNM1Q9NRU3 951 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
HNRNPC-230ENST00000557201 ZNF521Q96K83 1311 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 PLIN1O60240 522 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 GYG1P46976 350 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 RASA3Q14644 834 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 TEPSINQ96N21 525 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 C9orf78Q9NZ63 289 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
HNRNPC-230ENST00000557201 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-230ENST00000557201 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms