RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ANGEL2Q5VTE6 544 aaKnown RBP14.87□□□□□ -0.03
SYNE2-226ENST00000557084 CST9Q5W186 159 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 SIL1Q9H173 461 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 JAG2Q9Y219 1238 aa14.87□□□□□ -0.03
SYNE2-226ENST00000557084 RASSF10A6NK89 507 aa14.86□□□□□ -0.03
SYNE2-226ENST00000557084 ADM5C9JUS6 153 aa14.86□□□□□ -0.03
SYNE2-226ENST00000557084 SASH1O94885 1247 aa14.86□□□□□ -0.03
SYNE2-226ENST00000557084 IFIT1P09914 478 aaKnown RBP14.86□□□□□ -0.03
SYNE2-226ENST00000557084 ECE1P42892 770 aa14.86□□□□□ -0.03
SYNE2-226ENST00000557084 PUM3Q15397 648 aaKnown RBP14.86□□□□□ -0.03
SYNE2-226ENST00000557084 ASTN2O75129 1339 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-226ENST00000557084 IRS2Q9Y4H2 1338 aa14.86□□□□□ -0.03
SYNE2-226ENST00000557084 F8W031 263 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-226ENST00000557084 GNAI2P04899 355 aa14.85□□□□□ -0.03
SYNE2-226ENST00000557084 PTPN12Q05209 780 aaKnown RBP14.85□□□□□ -0.03
SYNE2-226ENST00000557084 C2orf69Q8N8R5 385 aa14.85□□□□□ -0.03
SYNE2-226ENST00000557084 FAM84BQ96KN1 310 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-226ENST00000557084 CEP126Q9P2H0 1117 aa14.85□□□□□ -0.03
SYNE2-226ENST00000557084 TLL2Q9Y6L7 1015 aa14.85□□□□□ -0.03
SYNE2-226ENST00000557084 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 SLC5A1P13866 664 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-226ENST00000557084 RBM5P52756 815 aaKnown RBP eCLIP14.84□□□□□ -0.03
SYNE2-226ENST00000557084 DLGAP5Q15398 846 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 AIDAQ96BJ3 306 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 CAPNS2Q96L46 248 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
SYNE2-226ENST00000557084 WNT10BO00744 389 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 CIAO1O76071 339 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 HUNKP57058 714 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 FKBP1AP62942 108 aaKnown RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 CHAF1AQ13111 956 aaPredicted RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 MFSD14BQ5SR56 506 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 DLK2Q6UY11 383 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 SAPCD2Q86UD0 394 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 TMEM57Q8N5G2 664 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 LPIN2Q92539 896 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 GBA2Q9HCG7 927 aaPredicted RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 IQSEC3Q9UPP2 1182 aaPredicted RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 PITPNM2Q9BZ72 1349 aa14.83□□□□□ -0.04
SYNE2-226ENST00000557084 WDR33Q9C0J8 1336 aaKnown RBP14.83□□□□□ -0.04
SYNE2-226ENST00000557084 MYO1BO43795 1136 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 HSPA1AP0DMV8 641 aaKnown RBP14.82□□□□□ -0.04
SYNE2-226ENST00000557084 HSPA1BP0DMV9 641 aaKnown RBP14.82□□□□□ -0.04
SYNE2-226ENST00000557084 BCAMP50895 628 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 CYP4F22Q6NT55 531 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 ATG9AQ7Z3C6 839 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 FBXO33Q7Z6M2 555 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 CERS5Q8N5B7 392 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 CDCA5Q96FF9 252 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 PA2G4Q9UQ80 394 aaKnown RBP14.82□□□□□ -0.04
SYNE2-226ENST00000557084 FAM205AQ6ZU69 1335 aa14.82□□□□□ -0.04
SYNE2-226ENST00000557084 PSME4Q14997 1843 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 NF2P35240 595 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
SYNE2-226ENST00000557084 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 APOBEC3FQ8IUX4 373 aaKnown RBP14.81□□□□□ -0.04
SYNE2-226ENST00000557084 TBC1D22AQ8WUA7 517 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
SYNE2-226ENST00000557084 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
SYNE2-226ENST00000557084 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
SYNE2-226ENST00000557084 MS4A1P11836 297 aa14.8□□□□□ -0.04
SYNE2-226ENST00000557084 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-226ENST00000557084 CFAP100Q494V2 611 aa14.8□□□□□ -0.04
SYNE2-226ENST00000557084 HHIPL1Q96JK4 782 aa14.8□□□□□ -0.04
SYNE2-226ENST00000557084 SCAF8Q9UPN6 1271 aaKnown RBP14.8□□□□□ -0.04
SYNE2-226ENST00000557084 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
SYNE2-226ENST00000557084 FGFR2P21802 821 aa14.79□□□□□ -0.04
SYNE2-226ENST00000557084 MTX1Q13505 466 aa14.79□□□□□ -0.04
SYNE2-226ENST00000557084 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 ZNF157P51786 506 aaPredicted RBP14.78□□□□□ -0.04
SYNE2-226ENST00000557084 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
SYNE2-226ENST00000557084 PRAMEF18Q5VWM3 479 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 MTMR14Q8NCE2 650 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 VEZTQ9HBM0 779 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 SERPINA10Q9UK55 444 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 AKAP2Q9Y2D5 859 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 POLR2AP24928 1970 aaKnown RBP14.78□□□□□ -0.04
SYNE2-226ENST00000557084 A0A1B0GUL6 1792 aa14.78□□□□□ -0.04
SYNE2-226ENST00000557084 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
SYNE2-226ENST00000557084 MAP2K2P36507 400 aa14.77□□□□□ -0.05
SYNE2-226ENST00000557084 FKBP1BP68106 108 aa14.77□□□□□ -0.05
SYNE2-226ENST00000557084 OS9Q13438 667 aaPredicted RBP14.77□□□□□ -0.05
SYNE2-226ENST00000557084 RGMBQ6NW40 437 aa14.77□□□□□ -0.05
SYNE2-226ENST00000557084 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
SYNE2-226ENST00000557084 AOC2O75106 756 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 TFCP2Q12800 502 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 NOGQ13253 232 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 GORABQ5T7V8 394 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
SYNE2-226ENST00000557084 ZBED3Q96IU2 234 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms