RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 DEFB129Q9H1M3 183 aa21.67■■□□□ 1.06
CHGA-206ENST00000556876 KLRK1P26718 216 aa21.66■■□□□ 1.06
CHGA-206ENST00000556876 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
CHGA-206ENST00000556876 IRS2Q9Y4H2 1338 aa21.65■■□□□ 1.06
CHGA-206ENST00000556876 LDLRAD1Q5T700 205 aa21.65■■□□□ 1.06
CHGA-206ENST00000556876 SLC4A10Q6U841 1118 aa21.65■■□□□ 1.06
CHGA-206ENST00000556876 FAM9BQ8IZU0 186 aa21.65■■□□□ 1.06
CHGA-206ENST00000556876 HELBQ8NG08 1087 aaPredicted RBP21.65■■□□□ 1.06
CHGA-206ENST00000556876 TNFAIP1Q13829 316 aa21.64■■□□□ 1.05
CHGA-206ENST00000556876 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
CHGA-206ENST00000556876 MOB2Q70IA6 237 aa21.64■■□□□ 1.05
CHGA-206ENST00000556876 CFHR5Q9BXR6 569 aa21.64■■□□□ 1.05
CHGA-206ENST00000556876 SLC10A4Q96EP9 437 aa21.63■■□□□ 1.05
CHGA-206ENST00000556876 ANGEL1Q9UNK9 670 aaKnown RBP21.63■■□□□ 1.05
CHGA-206ENST00000556876 FAM205AQ6ZU69 1335 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 MROH5Q6ZUA9 1318 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 CASP8AP2Q9UKL3 1982 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 SPDYE2BA6NHP3 402 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 MANSC4A6NHS7 340 aaPredicted RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 PLIN1O60240 522 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 SPDYE6P0CI01 402 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 ZBTB48P10074 688 aaPredicted RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 HIBADHP31937 336 aaKnown RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 PTPN12Q05209 780 aaKnown RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 CFAP100Q494V2 611 aa21.62■■□□□ 1.05
CHGA-206ENST00000556876 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 SCAF8Q9UPN6 1271 aaKnown RBP21.62■■□□□ 1.05
CHGA-206ENST00000556876 PTPRCP08575 1304 aa21.61■■□□□ 1.05
CHGA-206ENST00000556876 EPHA10Q5JZY3 1008 aa21.61■■□□□ 1.05
CHGA-206ENST00000556876 SPRYD7Q5W111 196 aa21.61■■□□□ 1.05
CHGA-206ENST00000556876 CERS5Q8N5B7 392 aa21.61■■□□□ 1.05
CHGA-206ENST00000556876 SERPINA10Q9UK55 444 aa21.61■■□□□ 1.05
CHGA-206ENST00000556876 UTYO14607 1347 aa21.6■■□□□ 1.05
CHGA-206ENST00000556876 RBM5P52756 815 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHGA-206ENST00000556876 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
CHGA-206ENST00000556876 E9PSI1 815 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 GPR25O00155 361 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 SNAP23O00161 211 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 IREB2P48200 963 aaKnown RBP21.59■■□□□ 1.05
CHGA-206ENST00000556876 CAVIN4Q5BKX8 364 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 VPS37DQ86XT2 251 aa21.59■■□□□ 1.05
CHGA-206ENST00000556876 ZNF594Q96JF6 807 aaPredicted RBP21.59■■□□□ 1.05
CHGA-206ENST00000556876 F8W031 263 aaPredicted RBP21.58■■□□□ 1.05
CHGA-206ENST00000556876 TBC1D8O95759 1140 aa21.58■■□□□ 1.05
CHGA-206ENST00000556876 PRKG1Q13976 671 aa21.58■■□□□ 1.05
CHGA-206ENST00000556876 MFSD14BQ5SR56 506 aa21.58■■□□□ 1.05
CHGA-206ENST00000556876 TBC1D22AQ8WUA7 517 aa21.58■■□□□ 1.05
CHGA-206ENST00000556876 ZNF296Q8WUU4 475 aaPredicted RBP21.58■■□□□ 1.05
CHGA-206ENST00000556876 PRMT6Q96LA8 375 aaPredicted RBP21.58■■□□□ 1.05
CHGA-206ENST00000556876 RABL6Q3YEC7 729 aaPredicted RBP21.57■■□□□ 1.04
CHGA-206ENST00000556876 VEZTQ9HBM0 779 aa21.57■■□□□ 1.04
CHGA-206ENST00000556876 RIPOR2Q9Y4F9 1068 aa21.57■■□□□ 1.04
CHGA-206ENST00000556876 AKAP11Q9UKA4 1901 aa21.57■■□□□ 1.04
CHGA-206ENST00000556876 FKTNO75072 461 aa21.56■■□□□ 1.04
CHGA-206ENST00000556876 TNNI2P48788 182 aa21.56■■□□□ 1.04
CHGA-206ENST00000556876 HDLBPQ00341 1268 aaKnown RBP21.56■■□□□ 1.04
CHGA-206ENST00000556876 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
CHGA-206ENST00000556876 SUCLG2Q96I99 432 aa21.56■■□□□ 1.04
CHGA-206ENST00000556876 FAM84BQ96KN1 310 aaPredicted RBP21.56■■□□□ 1.04
CHGA-206ENST00000556876 TTF2Q9UNY4 1162 aaKnown RBP21.56■■□□□ 1.04
CHGA-206ENST00000556876 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
CHGA-206ENST00000556876 NBPF7P0C2Y1 421 aaPredicted RBP21.55■■□□□ 1.04
CHGA-206ENST00000556876 RASA3Q14644 834 aa21.55■■□□□ 1.04
CHGA-206ENST00000556876 MRIQ9BWK5 157 aa21.55■■□□□ 1.04
CHGA-206ENST00000556876 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
CHGA-206ENST00000556876 CLRN2A0PK11 232 aa21.54■■□□□ 1.04
CHGA-206ENST00000556876 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
CHGA-206ENST00000556876 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
CHGA-206ENST00000556876 METTL24Q5JXM2 366 aa21.54■■□□□ 1.04
CHGA-206ENST00000556876 FBXO46Q6PJ61 603 aaPredicted RBP21.54■■□□□ 1.04
CHGA-206ENST00000556876 FBXO33Q7Z6M2 555 aa21.54■■□□□ 1.04
CHGA-206ENST00000556876 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
CHGA-206ENST00000556876 SUGT1Q9Y2Z0 365 aa21.54■■□□□ 1.04
CHGA-206ENST00000556876 PDE8BO95263 885 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 GYG1P46976 350 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 SPDYE2Q495Y8 402 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 IFNL1Q8IU54 200 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 HOOK2Q96ED9 719 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 BICC1Q9H694 974 aaKnown RBP21.53■■□□□ 1.04
CHGA-206ENST00000556876 HPS5Q9UPZ3 1129 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 KIF16BQ96L93 1317 aa21.53■■□□□ 1.04
CHGA-206ENST00000556876 SPEF2Q9C093 1822 aa21.52■■□□□ 1.04
CHGA-206ENST00000556876 ALDH1L2Q3SY69 923 aa21.52■■□□□ 1.04
CHGA-206ENST00000556876 DZIP1LQ8IYY4 767 aaKnown RBP21.52■■□□□ 1.04
CHGA-206ENST00000556876 KAZALD1Q96I82 304 aa21.52■■□□□ 1.04
CHGA-206ENST00000556876 WNK4Q96J92 1243 aa21.52■■□□□ 1.04
CHGA-206ENST00000556876 USP2O75604 605 aaPredicted RBP21.51■■□□□ 1.03
CHGA-206ENST00000556876 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
CHGA-206ENST00000556876 NBPF12Q5TAG4 269 aaPredicted RBP21.51■■□□□ 1.03
CHGA-206ENST00000556876 ZNF70Q9UC06 446 aaPredicted RBP21.51■■□□□ 1.03
CHGA-206ENST00000556876 MAST3O60307 1309 aa21.51■■□□□ 1.03
CHGA-206ENST00000556876 CT47B1P0C2W7 299 aaPredicted RBP21.5■■□□□ 1.03
CHGA-206ENST00000556876 CRKP46108 304 aa21.5■■□□□ 1.03
CHGA-206ENST00000556876 PUS3Q9BZE2 481 aaKnown RBP21.5■■□□□ 1.03
CHGA-206ENST00000556876 JAG2Q9Y219 1238 aa21.5■■□□□ 1.03
CHGA-206ENST00000556876 ARHGEF6Q15052 776 aa21.49■■□□□ 1.03
CHGA-206ENST00000556876 TEKT1Q969V4 418 aa21.49■■□□□ 1.03
CHGA-206ENST00000556876 TMOD2Q9NZR1 351 aa21.49■■□□□ 1.03
CHGA-206ENST00000556876 FBXO3Q9UK99 471 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms