RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 BCAMP50895 628 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 GRIK5Q16478 980 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 DEFB115Q30KQ5 88 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 CYP4F22Q6NT55 531 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 SAPCD2Q86UD0 394 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 DCPSQ96C86 337 aaKnown RBP10.13□□□□□ -0.79
VTI1B-206ENST00000556461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
VTI1B-206ENST00000556461 POLR2AP24928 1970 aaKnown RBP10.13□□□□□ -0.79
VTI1B-206ENST00000556461 FAM205AQ6ZU69 1335 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 CIAO1O76071 339 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 HSPA1AP0DMV8 641 aaKnown RBP10.12□□□□□ -0.79
VTI1B-206ENST00000556461 HSPA1BP0DMV9 641 aaKnown RBP10.12□□□□□ -0.79
VTI1B-206ENST00000556461 PUM3Q15397 648 aaKnown RBP10.12□□□□□ -0.79
VTI1B-206ENST00000556461 PRAMEF18Q5VWM3 479 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 OGFOD1Q8N543 542 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 CDCA5Q96FF9 252 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 COPRSQ9NQ92 184 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 TRPM7Q96QT4 1865 aa10.12□□□□□ -0.79
VTI1B-206ENST00000556461 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
VTI1B-206ENST00000556461 PNMA6EA0A0J9YXQ4 647 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 AOC2O75106 756 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 GNAI2P04899 355 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 FKBP1AP62942 108 aaKnown RBP10.11□□□□□ -0.79
VTI1B-206ENST00000556461 CHAF1AQ13111 956 aaPredicted RBP10.11□□□□□ -0.79
VTI1B-206ENST00000556461 GRM1Q13255 1194 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 MTX1Q13505 466 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 CFAP100Q494V2 611 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 MFSD14BQ5SR56 506 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
VTI1B-206ENST00000556461 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 DZIP1LQ8IYY4 767 aaKnown RBP10.11□□□□□ -0.79
VTI1B-206ENST00000556461 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 CAPNS2Q96L46 248 aa10.11□□□□□ -0.79
VTI1B-206ENST00000556461 COL1A1P02452 1464 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 PITPNM2Q9BZ72 1349 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 IFIT1P09914 478 aaKnown RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 SLC5A1P13866 664 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 ADORA1P30542 326 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 IL15P40933 162 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 ATP2B3Q16720 1220 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 VPS37DQ86XT2 251 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 ITPRIPQ8IWB1 547 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 FTSJ3Q8IY81 847 aaKnown RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 LPIN2Q92539 896 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 PRMT6Q96LA8 375 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 ZIC5Q96T25 663 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 GBA2Q9HCG7 927 aaPredicted RBP10.1□□□□□ -0.79
VTI1B-206ENST00000556461 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 HDAC9Q9UKV0 1011 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 HDAC5Q9UQL6 1122 aa10.1□□□□□ -0.79
VTI1B-206ENST00000556461 CLRN2A0PK11 232 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 HUNKP57058 714 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 TIMM10P62072 90 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 TFCP2Q12800 502 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
VTI1B-206ENST00000556461 TTF2Q9UNY4 1162 aaKnown RBP10.09□□□□□ -0.79
VTI1B-206ENST00000556461 FOXN1O15353 648 aa10.08□□□□□ -0.8
VTI1B-206ENST00000556461 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
VTI1B-206ENST00000556461 PHKA1P46020 1223 aa10.08□□□□□ -0.8
VTI1B-206ENST00000556461 MMP14P50281 582 aa10.08□□□□□ -0.8
VTI1B-206ENST00000556461 POLA2Q14181 598 aa10.08□□□□□ -0.8
VTI1B-206ENST00000556461 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
VTI1B-206ENST00000556461 FAM155AB1AL88 458 aaPredicted RBP10.07□□□□□ -0.8
VTI1B-206ENST00000556461 ECE1P42892 770 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 CRKP46108 304 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 RBM5P52756 815 aaKnown RBP eCLIP10.07□□□□□ -0.8
VTI1B-206ENST00000556461 ATP8B2P98198 1209 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
VTI1B-206ENST00000556461 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 HHIPL1Q96JK4 782 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 FZD1Q9UP38 647 aa10.07□□□□□ -0.8
VTI1B-206ENST00000556461 A0A1B0GUL7 405 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 UBE2Q2LH0YL09 131 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 PRKG1Q13976 671 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 C20orf194Q5TEA3 1177 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 CCDC102BQ68D86 513 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 RGMBQ6NW40 437 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
VTI1B-206ENST00000556461 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 XAGE2Q96GT9 111 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 DEFB129Q9H1M3 183 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 TDRD3Q9H7E2 651 aaKnown RBP10.06□□□□□ -0.8
VTI1B-206ENST00000556461 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 ZNF70Q9UC06 446 aaPredicted RBP10.06□□□□□ -0.8
VTI1B-206ENST00000556461 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 THSD7BQ9C0I4 1608 aa10.06□□□□□ -0.8
VTI1B-206ENST00000556461 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
VTI1B-206ENST00000556461 ZNF157P51786 506 aaPredicted RBP10.05□□□□□ -0.8
VTI1B-206ENST00000556461 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms