RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PLIN1O60240 522 aa16.87■□□□□ 0.29
TGFB3-204ENST00000556285 FKBP1BP68106 108 aa16.87■□□□□ 0.29
TGFB3-204ENST00000556285 PRKG1Q13976 671 aa16.87■□□□□ 0.29
TGFB3-204ENST00000556285 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
TGFB3-204ENST00000556285 JAG2Q9Y219 1238 aa16.87■□□□□ 0.29
TGFB3-204ENST00000556285 C15orf52Q6ZUT6 534 aaKnown RBP16.86■□□□□ 0.29
TGFB3-204ENST00000556285 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
TGFB3-204ENST00000556285 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
TGFB3-204ENST00000556285 HTTP42858 3142 aa16.85■□□□□ 0.29
TGFB3-204ENST00000556285 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
TGFB3-204ENST00000556285 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
TGFB3-204ENST00000556285 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
TGFB3-204ENST00000556285 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
TGFB3-204ENST00000556285 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
TGFB3-204ENST00000556285 ALDH1L1O75891 902 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 IL1R1P14778 569 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 LDHAL6AQ6ZMR3 332 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
TGFB3-204ENST00000556285 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
TGFB3-204ENST00000556285 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
TGFB3-204ENST00000556285 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
TGFB3-204ENST00000556285 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
TGFB3-204ENST00000556285 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
TGFB3-204ENST00000556285 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
TGFB3-204ENST00000556285 CNNM1Q9NRU3 951 aa16.83■□□□□ 0.28
TGFB3-204ENST00000556285 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
TGFB3-204ENST00000556285 TM4SF4P48230 202 aa16.82■□□□□ 0.28
TGFB3-204ENST00000556285 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
TGFB3-204ENST00000556285 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
TGFB3-204ENST00000556285 APOBEC3FQ8IUX4 373 aaKnown RBP16.82■□□□□ 0.28
TGFB3-204ENST00000556285 MRPL50Q8N5N7 158 aaKnown RBP16.82■□□□□ 0.28
TGFB3-204ENST00000556285 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
TGFB3-204ENST00000556285 MMP14P50281 582 aa16.81■□□□□ 0.28
TGFB3-204ENST00000556285 PRMT6Q96LA8 375 aaPredicted RBP16.81■□□□□ 0.28
TGFB3-204ENST00000556285 DEFB129Q9H1M3 183 aa16.81■□□□□ 0.28
TGFB3-204ENST00000556285 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
TGFB3-204ENST00000556285 CENPFP49454 3210 aa16.81■□□□□ 0.28
TGFB3-204ENST00000556285 ZSWIM8A7E2V4 1837 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 NF2P35240 595 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 GYG1P46976 350 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 CFAP100Q494V2 611 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 MTMR14Q8NCE2 650 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
TGFB3-204ENST00000556285 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
TGFB3-204ENST00000556285 UTYO14607 1347 aa16.79■□□□□ 0.28
TGFB3-204ENST00000556285 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
TGFB3-204ENST00000556285 GPR25O00155 361 aa16.79■□□□□ 0.28
TGFB3-204ENST00000556285 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
TGFB3-204ENST00000556285 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
TGFB3-204ENST00000556285 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
TGFB3-204ENST00000556285 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
TGFB3-204ENST00000556285 GJA5P36382 358 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 FKBP1AP62942 108 aaKnown RBP16.78■□□□□ 0.28
TGFB3-204ENST00000556285 CAP1Q01518 475 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 TDRD7Q8NHU6 1098 aaKnown RBP16.78■□□□□ 0.28
TGFB3-204ENST00000556285 FAM84BQ96KN1 310 aaPredicted RBP16.78■□□□□ 0.28
TGFB3-204ENST00000556285 RIPOR2Q9Y4F9 1068 aa16.78■□□□□ 0.28
TGFB3-204ENST00000556285 COL1A1P02452 1464 aaPredicted RBP16.78■□□□□ 0.28
TGFB3-204ENST00000556285 FAM205AQ6ZU69 1335 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 ZBTB22O15209 634 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 GRIK5Q16478 980 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
TGFB3-204ENST00000556285 SSH1Q8WYL5 1049 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
TGFB3-204ENST00000556285 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.27
TGFB3-204ENST00000556285 BRCA2P51587 3418 aa16.77■□□□□ 0.27
TGFB3-204ENST00000556285 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 HIBADHP31937 336 aaKnown RBP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 RABL6Q3YEC7 729 aaPredicted RBP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 KLHDC4Q8TBB5 520 aa16.76■□□□□ 0.27
TGFB3-204ENST00000556285 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 RBBP6Q7Z6E9 1792 aaKnown RBP16.76■□□□□ 0.27
TGFB3-204ENST00000556285 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
TGFB3-204ENST00000556285 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
TGFB3-204ENST00000556285 CDCA7LQ96GN5 454 aa16.75■□□□□ 0.27
TGFB3-204ENST00000556285 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 RASA3Q14644 834 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 WNK4Q96J92 1243 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 CFHR5Q9BXR6 569 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 USP44Q9H0E7 712 aa16.74■□□□□ 0.27
TGFB3-204ENST00000556285 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
TGFB3-204ENST00000556285 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
TGFB3-204ENST00000556285 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 E9PSI1 815 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 MYO1BO43795 1136 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 FBXO33Q7Z6M2 555 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 VGLL2Q8N8G2 317 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
TGFB3-204ENST00000556285 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
TGFB3-204ENST00000556285 PPP2R3BQ9Y5P8 575 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms