RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 XAGE2Q96GT9 111 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 EYA3Q99504 573 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 POLLQ9UGP5 575 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 SLX4Q8IY92 1834 aa12.31□□□□□ -0.44
MTHFD1-213ENST00000556284 ZNF609O15014 1411 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 SNAP23O00161 211 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 PDE4AP27815 886 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 GORABQ5T7V8 394 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 PSMD1Q99460 953 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 DBNLQ9UJU6 430 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-213ENST00000556284 WTIPA6NIX2 430 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 MX1P20591 662 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 ADORA1P30542 326 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 CCDC158Q5M9N0 1113 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 OSBPL3Q9H4L5 887 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 AOX1Q06278 1338 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 TTC41PQ6P2S7 1318 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 SALL3Q9BXA9 1300 aa12.29□□□□□ -0.44
MTHFD1-213ENST00000556284 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 ERC2O15083 957 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 PDE1AP54750 535 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 FKBP4Q02790 459 aaKnown RBP eCLIP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 WASHC4Q2M389 1173 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 VPS37DQ86XT2 251 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 ZNF512BQ96KM6 892 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 GNL3LQ9NVN8 582 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
MTHFD1-213ENST00000556284 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 ATP5JP18859 108 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 KLRK1P26718 216 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 BCAMP50895 628 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 TTC39AQ5SRH9 613 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 LTBP3Q9NS15 1303 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
MTHFD1-213ENST00000556284 G3V3G9 751 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 ARID4AP29374 1257 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 PHKA1P46020 1223 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 GYG1P46976 350 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 RGS3P49796 1198 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 COA1Q9GZY4 146 aa12.26□□□□□ -0.45
MTHFD1-213ENST00000556284 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 NFKBIEO00221 500 aa12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 SEMA3EO15041 775 aa12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
MTHFD1-213ENST00000556284 PPIP5K2O43314 1243 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 IL1R1P14778 569 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 GPR162Q16538 588 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 ARHGAP27Q6ZUM4 889 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 PODNQ7Z5L7 613 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 HAUS7Q99871 368 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 ZNF277Q9NRM2 450 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
MTHFD1-213ENST00000556284 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 PDS5AQ29RF7 1337 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 FRAT2O75474 233 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 AOC3Q16853 763 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
MTHFD1-213ENST00000556284 LARGE2Q8N3Y3 721 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms