RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
CHMP4BP1-201ENST00000556017 MKRN3Q13064 507 aaKnown RBP18.32■□□□□ 0.52
CHMP4BP1-201ENST00000556017 PRKG1Q13976 671 aa18.32■□□□□ 0.52
CHMP4BP1-201ENST00000556017 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
CHMP4BP1-201ENST00000556017 ARAP2Q8WZ64 1704 aa18.32■□□□□ 0.52
CHMP4BP1-201ENST00000556017 GPR25O00155 361 aa18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 TTLL12Q14166 644 aaPredicted RBP18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 SPRYD7Q5W111 196 aa18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 KAZALD1Q96I82 304 aa18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
CHMP4BP1-201ENST00000556017 LMBR1LQ6UX01 489 aa18.3■□□□□ 0.52
CHMP4BP1-201ENST00000556017 CLMNQ96JQ2 1002 aa18.3■□□□□ 0.52
CHMP4BP1-201ENST00000556017 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
CHMP4BP1-201ENST00000556017 MKI67P46013 3256 aaKnown RBP18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 NF2P35240 595 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 KCNJ4P48050 445 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 JAG2Q9Y219 1238 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 BRCA2P51587 3418 aa18.29■□□□□ 0.52
CHMP4BP1-201ENST00000556017 GRM8O00222 908 aa18.28■□□□□ 0.52
CHMP4BP1-201ENST00000556017 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
CHMP4BP1-201ENST00000556017 DLGAP5Q15398 846 aa18.28■□□□□ 0.52
CHMP4BP1-201ENST00000556017 CFAP100Q494V2 611 aa18.28■□□□□ 0.52
CHMP4BP1-201ENST00000556017 ARMC9Q7Z3E5 817 aa18.28■□□□□ 0.52
CHMP4BP1-201ENST00000556017 F8W031 263 aaPredicted RBP18.27■□□□□ 0.52
CHMP4BP1-201ENST00000556017 GJA5P36382 358 aa18.27■□□□□ 0.52
CHMP4BP1-201ENST00000556017 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CLRN2A0PK11 232 aa18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 IGF2BP3O00425 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 SREBF2Q12772 1141 aa18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 PKN2Q16513 984 aaKnown RBP18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 NBPF12Q5TAG4 269 aaPredicted RBP18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
CHMP4BP1-201ENST00000556017 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CAP1Q01518 475 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 GRIK5Q16478 980 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 LDHAL6AQ6ZMR3 332 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 ZNF804AQ7Z570 1209 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 TDRD7Q8NHU6 1098 aaKnown RBP18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 WNK4Q96J92 1243 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 PPP2R3BQ9Y5P8 575 aa18.25■□□□□ 0.51
CHMP4BP1-201ENST00000556017 FKTNO75072 461 aa18.24■□□□□ 0.51
CHMP4BP1-201ENST00000556017 IFNL1Q8IU54 200 aa18.24■□□□□ 0.51
CHMP4BP1-201ENST00000556017 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
CHMP4BP1-201ENST00000556017 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
CHMP4BP1-201ENST00000556017 UTYO14607 1347 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 PLIN1O60240 522 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 GYG1P46976 350 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 FBXO46Q6PJ61 603 aaPredicted RBP18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 SLC10A4Q96EP9 437 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 TEPSINQ96N21 525 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 RIPOR2Q9Y4F9 1068 aa18.23■□□□□ 0.51
CHMP4BP1-201ENST00000556017 MANSC4A6NHS7 340 aaPredicted RBP18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 ALDH1L1O75891 902 aa18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 RASA3Q14644 834 aa18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 PTPN18Q99952 460 aa18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
CHMP4BP1-201ENST00000556017 UNCXA6NJT0 531 aa18.21■□□□□ 0.51
CHMP4BP1-201ENST00000556017 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
CHMP4BP1-201ENST00000556017 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
CHMP4BP1-201ENST00000556017 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
CHMP4BP1-201ENST00000556017 INHBEP58166 350 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 RABL6Q3YEC7 729 aaPredicted RBP18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 MFSD14BQ5SR56 506 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 SRCIN1Q9C0H9 1055 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ZNF70Q9UC06 446 aaPredicted RBP18.2■□□□□ 0.5
CHMP4BP1-201ENST00000556017 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 TESPA1A2RU30 521 aaPredicted RBP18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 PPP1R12BO60237 982 aaPredicted RBP18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ALDH1A1P00352 501 aa18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 SUPT20HL1Q3ZLR7 823 aa18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 OTOP1Q7RTM1 612 aa18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 TDRD3Q9H7E2 651 aaKnown RBP18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 SERPINA10Q9UK55 444 aa18.19■□□□□ 0.5
CHMP4BP1-201ENST00000556017 HIBADHP31937 336 aaKnown RBP18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 SLC4A10Q6U841 1118 aa18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 DZIP1LQ8IYY4 767 aaKnown RBP18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 MS4A4AQ96JQ5 239 aa18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
CHMP4BP1-201ENST00000556017 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms