RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	RGS19	P49795	217 aa		13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	CXCL9	Q07325	125 aa		13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	VGLL2	Q8N8G2	317 aa		13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	MINPP1	Q9UNW1	487 aa		13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	AKAP2	Q9Y2D5	859 aa		13.91	□□□□□ -0.18
RAD51B-222	ENST00000555907	SPEF2	Q9C093	1822 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	C6orf229	H3BNL8	230 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	PDE8B	O95263	885 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	SOX10	P56693	466 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	GPSM2	P81274	684 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	TFCP2	Q12800	502 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	CLASRP	Q8N2M8	674 aa	Known RBP	13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	TRPM4	Q8TD43	1214 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	ANKRD2	Q9GZV1	360 aa		13.9	□□□□□ -0.18
RAD51B-222	ENST00000555907	WASHC4	Q2M389	1173 aa		13.89	□□□□□ -0.19
RAD51B-222	ENST00000555907	METTL24	Q5JXM2	366 aa		13.89	□□□□□ -0.19
RAD51B-222	ENST00000555907	LNPK	Q9C0E8	428 aa		13.89	□□□□□ -0.19
RAD51B-222	ENST00000555907	STAP2	Q9UGK3	403 aa		13.89	□□□□□ -0.19
RAD51B-222	ENST00000555907	POLL	Q9UGP5	575 aa		13.89	□□□□□ -0.19
RAD51B-222	ENST00000555907	APBB1	O00213	710 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	RIMBP2	O15034	1052 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	SMARCA5	O60264	1052 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	FGFR2	P21802	821 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	PDE4A	P27815	886 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	HIRA	P54198	1017 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	CHRND	Q07001	517 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	TNNI3K	Q59H18	835 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	USP48	Q86UV5	1035 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	EAF2	Q96CJ1	260 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	OSBPL3	Q9H4L5	887 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	IL1RAPL2	Q9NP60	686 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	FPGT-TNNI3K	V9GXZ4	949 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	SALL3	Q9BXA9	1300 aa		13.88	□□□□□ -0.19
RAD51B-222	ENST00000555907	POLR2A	P24928	1970 aa	Known RBP	13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	YDJC	A8MPS7	323 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	CA12	O43570	354 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	HUNK	P57058	714 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	UBE4A	Q14139	1066 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	TNIP1	Q15025	636 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	TBC1D16	Q8TBP0	767 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	EYA3	Q99504	573 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	DBNDD1	Q9H9R9	158 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	PODXL2	Q9NZ53	605 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	ANKIB1	Q9P2G1	1089 aa		13.87	□□□□□ -0.19
RAD51B-222	ENST00000555907	ZBTB22	O15209	634 aa		13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	PUM3	Q15397	648 aa	Known RBP	13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	RBM26	Q5T8P6	1007 aa	Known RBP	13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	PLEKHM2	Q8IWE5	1019 aa		13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	LPIN2	Q92539	896 aa		13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	CNOT7	Q9UIV1	285 aa	Known RBP	13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	LEMD3	Q9Y2U8	911 aa		13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD51B-222	ENST00000555907	UFL1	O94874	794 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	IFIT2	P09913	472 aa	Known RBP	13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	TIMM10	P62072	90 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	ATP2B3	Q16720	1220 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	DOK7	Q18PE1	504 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	C15orf52	Q6ZUT6	534 aa	Known RBP	13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	CDC37L1	Q7L3B6	337 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	SAMD7	Q7Z3H4	446 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	AACS	Q86V21	672 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	MICALL2	Q8IY33	904 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	GGA1	Q9UJY5	639 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	SCN9A	Q15858	1988 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	XDH	P47989	1333 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	AOX1	Q06278	1338 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907	TTC41P	Q6P2S7	1318 aa		13.85	□□□□□ -0.19
RAD51B-222	ENST00000555907		A0A1B0GUL7	405 aa		13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	ECE2	O60344	883 aa		13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	TAF5L	O75529	589 aa		13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	PDE1A	P54750	535 aa		13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	HELB	Q8NG08	1087 aa	Predicted RBP	13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	AKAP11	Q9UKA4	1901 aa		13.84	□□□□□ -0.19
RAD51B-222	ENST00000555907	ADM5	C9JUS6	153 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907		G3V3G9	751 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907		H7C1D1	291 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	PSMD14	O00487	310 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	TRPA1	O75762	1119 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	SLC5A1	P13866	664 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	MX1	P20591	662 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	ATP2B4	P23634	1241 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	NOG	Q13253	232 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	DCAF8	Q5TAQ9	597 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	XAGE2	Q96GT9	111 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	KCNQ5	Q9NR82	932 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	ECHDC1	Q9NTX5	307 aa		13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	DBNL	Q9UJU6	430 aa	Known RBP	13.83	□□□□□ -0.2
RAD51B-222	ENST00000555907	ZNF609	O15014	1411 aa		13.82	□□□□□ -0.2
RAD51B-222	ENST00000555907	IFIT1	P09914	478 aa	Known RBP	13.82	□□□□□ -0.2
RAD51B-222	ENST00000555907	ATP5J	P18859	108 aa		13.82	□□□□□ -0.2
RAD51B-222	ENST00000555907	KIF23	Q02241	960 aa	Predicted RBP	13.82	□□□□□ -0.2
RAD51B-222	ENST00000555907	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
RAD51B-222	ENST00000555907	GPATCH3	Q96I76	525 aa		13.82	□□□□□ -0.2

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