RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
HNRNPC-221ENST00000555883 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
HNRNPC-221ENST00000555883 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
HNRNPC-221ENST00000555883 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
HNRNPC-221ENST00000555883 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
HNRNPC-221ENST00000555883 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
HNRNPC-221ENST00000555883 ABHD8Q96I13 439 aa16■□□□□ 0.15
HNRNPC-221ENST00000555883 RIPOR2Q9Y4F9 1068 aa16■□□□□ 0.15
HNRNPC-221ENST00000555883 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
HNRNPC-221ENST00000555883 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
HNRNPC-221ENST00000555883 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
HNRNPC-221ENST00000555883 TDRD7Q8NHU6 1098 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-221ENST00000555883 BICC1Q9H694 974 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-221ENST00000555883 TSKSQ9UJT2 592 aa15.99■□□□□ 0.15
HNRNPC-221ENST00000555883 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
HNRNPC-221ENST00000555883 CSRNP1Q96S65 589 aa15.98■□□□□ 0.15
HNRNPC-221ENST00000555883 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
HNRNPC-221ENST00000555883 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 UNCXA6NJT0 531 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 MYO1BO43795 1136 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 PLIN1O60240 522 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 HIBADHP31937 336 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 FAM84BQ96KN1 310 aaPredicted RBP15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 RNF186Q9NXI6 227 aa15.97■□□□□ 0.15
HNRNPC-221ENST00000555883 KIF16BQ96L93 1317 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 MAP3K11Q16584 847 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 PRAMEF18Q5VWM3 479 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 PUS3Q9BZE2 481 aaKnown RBP15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 DEFB129Q9H1M3 183 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 SERPINA10Q9UK55 444 aa15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 SCAF8Q9UPN6 1271 aaKnown RBP15.96■□□□□ 0.15
HNRNPC-221ENST00000555883 UBE2Q2LH0YL09 131 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 PDE8BO95263 885 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 CFAP100Q494V2 611 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 LDLRAD1Q5T700 205 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 VGLL2Q8N8G2 317 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
HNRNPC-221ENST00000555883 ECM29Q5VYK3 1845 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 GYG1P46976 350 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 TM4SF4P48230 202 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 TTLL12Q14166 644 aaPredicted RBP15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 MFSD14BQ5SR56 506 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 MOB2Q70IA6 237 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
HNRNPC-221ENST00000555883 TRPA1O75762 1119 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 CAVIN4Q5BKX8 364 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 TBC1D22AQ8WUA7 517 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 PRMT6Q96LA8 375 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 CFHR5Q9BXR6 569 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 MCOLN1Q9GZU1 580 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
HNRNPC-221ENST00000555883 PPP1R12BO60237 982 aaPredicted RBP15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 HDLBPQ00341 1268 aaKnown RBP15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 SREBF2Q12772 1141 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 TNFAIP1Q13829 316 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 SUPT20HL1Q3ZLR7 823 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 VPS37DQ86XT2 251 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 HDAC5Q9UQL6 1122 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
HNRNPC-221ENST00000555883 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 RFX5P48382 616 aaPredicted RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 PTPN12Q05209 780 aaKnown RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 PUM3Q15397 648 aaKnown RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 MRIQ9BWK5 157 aa15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 TTF2Q9UNY4 1162 aaKnown RBP15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 SUGT1Q9Y2Z0 365 aa15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 AKAP11Q9UKA4 1901 aa15.91■□□□□ 0.14
HNRNPC-221ENST00000555883 EYA2O00167 538 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 ZBTB48P10074 688 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 FGFR2P21802 821 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 RGS19P49795 217 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 INHBEP58166 350 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 DGKZQ13574 1117 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 SPRYD7Q5W111 196 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 ANGEL1Q9UNK9 670 aaKnown RBP15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 PCDHAC2Q9Y5I4 1007 aa15.9■□□□□ 0.14
HNRNPC-221ENST00000555883 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
HNRNPC-221ENST00000555883 ZBTB22O15209 634 aa15.89■□□□□ 0.13
HNRNPC-221ENST00000555883 IFIT1P09914 478 aaKnown RBP15.89■□□□□ 0.13
HNRNPC-221ENST00000555883 UBTFL1P0CB47 393 aaPredicted RBP15.89■□□□□ 0.13
HNRNPC-221ENST00000555883 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.135e-14■■□□□ 12.8
HNRNPC-221ENST00000555883 LAMB1P07942 1786 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 CASP8AP2Q9UKL3 1982 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 CIAO1O76071 339 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 ALDH1A1P00352 501 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 CRKP46108 304 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 RASA3Q14644 834 aa15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
HNRNPC-221ENST00000555883 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms