RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
VRK1-204ENST00000555351 PAXIP1Q6ZW49 1069 aaPredicted RBP14.82□□□□□ -0.04
VRK1-204ENST00000555351 KIAA0825Q8IV33 1275 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 CDCA5Q96FF9 252 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 FAM84BQ96KN1 310 aaPredicted RBP14.82□□□□□ -0.04
VRK1-204ENST00000555351 ASTN2O75129 1339 aaPredicted RBP14.82□□□□□ -0.04
VRK1-204ENST00000555351 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
VRK1-204ENST00000555351 ARAP2Q8WZ64 1704 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 CA12O43570 354 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 GNAI3P08754 354 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
VRK1-204ENST00000555351 METTL24Q5JXM2 366 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 RGMBQ6NW40 437 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 APOBEC3FQ8IUX4 373 aaKnown RBP14.81□□□□□ -0.04
VRK1-204ENST00000555351 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 CCDC102AQ96A19 550 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
VRK1-204ENST00000555351 ECM29Q5VYK3 1845 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 EYA2O00167 538 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 CIAO1O76071 339 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 PTPN12Q05209 780 aaKnown RBP14.8□□□□□ -0.04
VRK1-204ENST00000555351 DLGAP5Q15398 846 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 CAVIN4Q5BKX8 364 aa14.8□□□□□ -0.04
VRK1-204ENST00000555351 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
VRK1-204ENST00000555351 ZBTB22O15209 634 aa14.79□□□□□ -0.04
VRK1-204ENST00000555351 FGFR2P21802 821 aa14.79□□□□□ -0.04
VRK1-204ENST00000555351 GYG1P46976 350 aa14.79□□□□□ -0.04
VRK1-204ENST00000555351 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
VRK1-204ENST00000555351 PUM3Q15397 648 aaKnown RBP14.79□□□□□ -0.04
VRK1-204ENST00000555351 ATF7IPQ6VMQ6 1270 aa14.79□□□□□ -0.04
VRK1-204ENST00000555351 PPP2R3BQ9Y5P8 575 aa14.79□□□□□ -0.04
VRK1-204ENST00000555351 MYO1BO43795 1136 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 IFIT1P09914 478 aaKnown RBP14.78□□□□□ -0.04
VRK1-204ENST00000555351 NF2P35240 595 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 MTX1Q13505 466 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 DLK2Q6UY11 383 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
VRK1-204ENST00000555351 TBC1D22AQ8WUA7 517 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 LPIN2Q92539 896 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 SERPINA10Q9UK55 444 aa14.78□□□□□ -0.04
VRK1-204ENST00000555351 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.04
VRK1-204ENST00000555351 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 FAM155AB1AL88 458 aaPredicted RBP14.77□□□□□ -0.05
VRK1-204ENST00000555351 AOC2O75106 756 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
VRK1-204ENST00000555351 TRIM27P14373 513 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 HDLBPQ00341 1268 aaKnown RBP14.77□□□□□ -0.05
VRK1-204ENST00000555351 MFSD14BQ5SR56 506 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 TNS4Q8IZW8 715 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 KLHDC4Q8TBB5 520 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 COPRSQ9NQ92 184 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 SUGT1Q9Y2Z0 365 aa14.77□□□□□ -0.05
VRK1-204ENST00000555351 SLC10A3P09131 477 aa14.76□□□□□ -0.05
VRK1-204ENST00000555351 IL15P40933 162 aaPredicted RBP14.76□□□□□ -0.05
VRK1-204ENST00000555351 ZNF157P51786 506 aaPredicted RBP14.76□□□□□ -0.05
VRK1-204ENST00000555351 GRM1Q13255 1194 aa14.76□□□□□ -0.05
VRK1-204ENST00000555351 CFAP100Q494V2 611 aa14.76□□□□□ -0.05
VRK1-204ENST00000555351 MEIS3Q99687 375 aa14.76□□□□□ -0.05
VRK1-204ENST00000555351 MRIQ9BWK5 157 aa14.76□□□□□ -0.05
VRK1-204ENST00000555351 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
VRK1-204ENST00000555351 UNCXA6NJT0 531 aa14.75□□□□□ -0.05
VRK1-204ENST00000555351 SLC5A1P13866 664 aa14.75□□□□□ -0.05
VRK1-204ENST00000555351 CEP126Q9P2H0 1117 aa14.75□□□□□ -0.05
VRK1-204ENST00000555351 MAST3O60307 1309 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
VRK1-204ENST00000555351 BCAR3O75815 825 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 LBX1P52954 281 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 PRMT6Q96LA8 375 aaPredicted RBP14.74□□□□□ -0.05
VRK1-204ENST00000555351 DEFB129Q9H1M3 183 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 SAGE1Q9NXZ1 904 aa14.74□□□□□ -0.05
VRK1-204ENST00000555351 TTF2Q9UNY4 1162 aaKnown RBP14.74□□□□□ -0.05
VRK1-204ENST00000555351 BCAMP50895 628 aa14.73□□□□□ -0.05
VRK1-204ENST00000555351 TNFAIP1Q13829 316 aa14.73□□□□□ -0.05
VRK1-204ENST00000555351 ARMC9Q7Z3E5 817 aa14.73□□□□□ -0.05
VRK1-204ENST00000555351 F8W031 263 aaPredicted RBP14.72□□□□□ -0.05
VRK1-204ENST00000555351 SEMA3EO15041 775 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 GNAI2P04899 355 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 MAP3K11Q16584 847 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 SUPT20HL1Q3ZLR7 823 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 LDLRAD1Q5T700 205 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 RASAL3Q86YV0 1011 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
VRK1-204ENST00000555351 FRAT1Q92837 279 aaPredicted RBP14.72□□□□□ -0.05
VRK1-204ENST00000555351 MYH13Q9UKX3 1938 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 SRGAP3O43295 1099 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 CRKP46108 304 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 RBM5P52756 815 aaKnown RBP eCLIP14.71□□□□□ -0.05
VRK1-204ENST00000555351 KIF23Q02241 960 aaPredicted RBP14.71□□□□□ -0.05
VRK1-204ENST00000555351 DZIP1LQ8IYY4 767 aaKnown RBP14.71□□□□□ -0.05
VRK1-204ENST00000555351 TEKT1Q969V4 418 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 SIL1Q9H173 461 aa14.71□□□□□ -0.05
VRK1-204ENST00000555351 GNL3LQ9NVN8 582 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms