RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KCNQ5Q9NR82 932 aa17.46■□□□□ 0.39
CHD8-208ENST00000555301 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
CHD8-208ENST00000555301 TTC41PQ6P2S7 1318 aa17.46■□□□□ 0.38
CHD8-208ENST00000555301 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
CHD8-208ENST00000555301 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 PSMD14O00487 310 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 MX1P20591 662 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 FKBP1AP62942 108 aaKnown RBP17.45■□□□□ 0.38
CHD8-208ENST00000555301 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
CHD8-208ENST00000555301 RASGRF1Q13972 1273 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
CHD8-208ENST00000555301 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 ERC2O15083 957 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 ATP5JP18859 108 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
CHD8-208ENST00000555301 MCAMP43121 646 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
CHD8-208ENST00000555301 SPATA5Q8NB90 893 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 SBF1O95248 1867 aa17.44■□□□□ 0.38
CHD8-208ENST00000555301 MFSD14BQ5SR56 506 aa17.43■□□□□ 0.38
CHD8-208ENST00000555301 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
CHD8-208ENST00000555301 AGBL3Q8NEM8 1001 aa17.43■□□□□ 0.38
CHD8-208ENST00000555301 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
CHD8-208ENST00000555301 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
CHD8-208ENST00000555301 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
CHD8-208ENST00000555301 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
CHD8-208ENST00000555301 SCARF1Q14162 830 aa17.42■□□□□ 0.38
CHD8-208ENST00000555301 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
CHD8-208ENST00000555301 DPF2Q92785 391 aa17.42■□□□□ 0.38
CHD8-208ENST00000555301 STAP2Q9UGK3 403 aa17.42■□□□□ 0.38
CHD8-208ENST00000555301 JAG2Q9Y219 1238 aa17.42■□□□□ 0.38
CHD8-208ENST00000555301 SUGT1Q9Y2Z0 365 aa17.42■□□□□ 0.38
CHD8-208ENST00000555301 MMP14P50281 582 aa17.41■□□□□ 0.38
CHD8-208ENST00000555301 PDE1AP54750 535 aa17.41■□□□□ 0.38
CHD8-208ENST00000555301 BOLA2Q9H3K6 86 aa17.41■□□□□ 0.38
CHD8-208ENST00000555301 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
CHD8-208ENST00000555301 COL1A1P02452 1464 aaPredicted RBP17.41■□□□□ 0.38
CHD8-208ENST00000555301 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
CHD8-208ENST00000555301 IGSF3O75054 1194 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 ZAP70P43403 619 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
CHD8-208ENST00000555301 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
CHD8-208ENST00000555301 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
CHD8-208ENST00000555301 GMLQ99445 158 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 HAUS7Q99871 368 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 DICER1Q9UPY3 1922 aaKnown RBP17.4■□□□□ 0.38
CHD8-208ENST00000555301 AOX1Q06278 1338 aa17.4■□□□□ 0.38
CHD8-208ENST00000555301 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
CHD8-208ENST00000555301 TTF1Q15361 905 aaPredicted RBP17.39■□□□□ 0.37
CHD8-208ENST00000555301 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 OGFOD1Q8N543 542 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 PI4K2BQ8TCG2 481 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
CHD8-208ENST00000555301 MXD3Q9BW11 206 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
CHD8-208ENST00000555301 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
CHD8-208ENST00000555301 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
CHD8-208ENST00000555301 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
CHD8-208ENST00000555301 PDE4AP27815 886 aa17.38■□□□□ 0.37
CHD8-208ENST00000555301 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
CHD8-208ENST00000555301 MAST3O60307 1309 aa17.38■□□□□ 0.37
CHD8-208ENST00000555301 H7C1D1 291 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
CHD8-208ENST00000555301 YY1P25490 414 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 SCNN1DP51172 638 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 GPRC5DQ9NZD1 345 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 LRP2BPQ9P2M1 347 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 CNOT7Q9UIV1 285 aaKnown RBP17.37■□□□□ 0.37
CHD8-208ENST00000555301 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
CHD8-208ENST00000555301 GOLIM4O00461 696 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 PRDX5P30044 214 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 TBC1D9Q6ZT07 1266 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 MICALL2Q8IY33 904 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 TTF2Q9UNY4 1162 aaKnown RBP17.36■□□□□ 0.37
CHD8-208ENST00000555301 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
CHD8-208ENST00000555301 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
CHD8-208ENST00000555301 ZNF280AP59817 542 aaPredicted RBP17.35■□□□□ 0.37
CHD8-208ENST00000555301 HDLBPQ00341 1268 aaKnown RBP17.35■□□□□ 0.37
CHD8-208ENST00000555301 DZIP1Q86YF9 867 aaKnown RBP17.35■□□□□ 0.37
CHD8-208ENST00000555301 MRIQ9BWK5 157 aa17.35■□□□□ 0.37
CHD8-208ENST00000555301 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
CHD8-208ENST00000555301 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
CHD8-208ENST00000555301 RAI14Q9P0K7 980 aa17.35■□□□□ 0.37
CHD8-208ENST00000555301 SCN9AQ15858 1988 aa17.35■□□□□ 0.37
CHD8-208ENST00000555301 VEGFAP15692 232 aaPredicted RBP17.34■□□□□ 0.37
CHD8-208ENST00000555301 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
CHD8-208ENST00000555301 GRIK5Q16478 980 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms