RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SPTLC2O15270 562 aa10.26□□□□□ -0.77
SYNE2-217ENST00000555022 SARM1Q6SZW1 724 aa10.26□□□□□ -0.77
SYNE2-217ENST00000555022 TXLNBQ8N3L3 684 aa10.26□□□□□ -0.77
SYNE2-217ENST00000555022 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
SYNE2-217ENST00000555022 RIN2Q8WYP3 895 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-217ENST00000555022 TFR2Q9UP52 801 aa10.26□□□□□ -0.77
SYNE2-217ENST00000555022 MYO5BQ9ULV0 1848 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 SOWAHDA6NJG2 315 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 LONRF2Q1L5Z9 754 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 LEKR1Q6ZMV7 388 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 FMR1NBQ8N0W7 255 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 STAMQ92783 540 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 CEP170BQ9Y4F5 1589 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 KLF18A0A0U1RQI7 1052 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 TULP2O00295 520 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 AKAP17AQ02040 695 aaKnown RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 NBPF6Q5VWK0 638 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 TRIM65Q6PJ69 517 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 ENGASEQ8NFI3 743 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 NBPF4Q96M43 638 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 RCOR1Q9UKL0 485 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 KIF20BQ96Q89 1820 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 VWA3AA6NCI4 1184 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 GRM8O00222 908 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 ABL1P00519 1130 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 CDC27P30260 824 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 PDE4BQ07343 736 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 CMTR1Q8N1G2 835 aaKnown RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 AK7Q96M32 723 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 MRPL44Q9H9J2 332 aaKnown RBP10.25□□□□□ -0.77
SYNE2-217ENST00000555022 L2HGDHQ9H9P8 463 aa10.25□□□□□ -0.77
SYNE2-217ENST00000555022 WDHD1O75717 1129 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 ZRANB2O95218 330 aaKnown RBP eCLIP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 KIF4BQ2VIQ3 1234 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 EP400NLQ6ZTU2 488 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 ZSCAN16Q9H4T2 348 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 INCENPQ9NQS7 918 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 MAP3K5Q99683 1374 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 LRRFIP1Q32MZ4 808 aaKnown RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 REXO1L1PQ8IX06 675 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 SMYD4Q8IYR2 804 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 EEF2KMTQ96G04 330 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 CDC5LQ99459 802 aaKnown RBP10.24□□□□□ -0.77
SYNE2-217ENST00000555022 ALKQ9UM73 1620 aa10.24□□□□□ -0.77
SYNE2-217ENST00000555022 A1BGP04217 495 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 SYKP43405 635 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 CAPZA3Q96KX2 299 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 PNKPQ96T60 521 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 BAG1Q99933 345 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-217ENST00000555022 AATKQ6ZMQ8 1374 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 RAI14Q9P0K7 980 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 KIF2AO00139 706 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-217ENST00000555022 APPP05067 770 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 FDPSP14324 419 aaKnown RBP10.23□□□□□ -0.77
SYNE2-217ENST00000555022 HOXC9P31274 260 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 CEBPAP49715 358 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-217ENST00000555022 NCAPHQ15003 741 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 JAKMIP3Q5VZ66 844 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
SYNE2-217ENST00000555022 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
SYNE2-217ENST00000555022 OSBPL5Q9H0X9 879 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-217ENST00000555022 EHD4Q9H223 541 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 SAMSN1Q9NSI8 373 aaKnown RBP10.22□□□□□ -0.77
SYNE2-217ENST00000555022 FAM53CQ9NYF3 392 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 ROBO2Q9HCK4 1378 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 ZNF609O15014 1411 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 FRMPD1Q5SYB0 1578 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 E7EWF7 191 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 CDC25AP30304 524 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 AFMP43652 599 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 SF3A3Q12874 501 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYNE2-217ENST00000555022 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
SYNE2-217ENST00000555022 PACS2Q86VP3 889 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 LINC00301Q8NCQ3 95 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 ACRBPQ8NEB7 543 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 hCG_1642624A0A1W2PR95 340 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 ENC1O14682 589 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 NLRP12P59046 1061 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 GRIN1Q05586 938 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 NCAPH2Q6IBW4 605 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 FUT8Q9BYC5 575 aa10.22□□□□□ -0.77
SYNE2-217ENST00000555022 CARMIL3Q8ND23 1372 aa10.21□□□□□ -0.77
SYNE2-217ENST00000555022 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
SYNE2-217ENST00000555022 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms