RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FAM84BQ96KN1 310 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 IQSEC3Q9UPP2 1182 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 AK9Q5TCS8 1911 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 ADM5C9JUS6 153 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 SRGAP3O43295 1099 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 SASH1O94885 1247 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
SHMT2-213ENST00000554600 SLC5A1P13866 664 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-213ENST00000554600 PUM3Q15397 648 aaKnown RBP13.27□□□□□ -0.29
SHMT2-213ENST00000554600 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 CNTNAP1P78357 1384 aa13.27□□□□□ -0.29
SHMT2-213ENST00000554600 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
SHMT2-213ENST00000554600 CST9Q5W186 159 aa13.26□□□□□ -0.29
SHMT2-213ENST00000554600 CERS5Q8N5B7 392 aa13.26□□□□□ -0.29
SHMT2-213ENST00000554600 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
SHMT2-213ENST00000554600 TDRD7Q8NHU6 1098 aaKnown RBP13.26□□□□□ -0.29
SHMT2-213ENST00000554600 CIAO1O76071 339 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 IL15P40933 162 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-213ENST00000554600 VEGFBP49765 207 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHMT2-213ENST00000554600 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 ATP2B3Q16720 1220 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 MFSD14BQ5SR56 506 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
SHMT2-213ENST00000554600 SCAF8Q9UPN6 1271 aaKnown RBP13.25□□□□□ -0.29
SHMT2-213ENST00000554600 FAM205AQ6ZU69 1335 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 RASSF10A6NK89 507 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 WNT10BO00744 389 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 RLBP1P12271 317 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 MMP14P50281 582 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 BCAMP50895 628 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 LPIN2Q92539 896 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 COPRSQ9NQ92 184 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 TLL2Q9Y6L7 1015 aa13.24□□□□□ -0.29
SHMT2-213ENST00000554600 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 MS4A1P11836 297 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 FGFR2P21802 821 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 FKBP1AP62942 108 aaKnown RBP13.23□□□□□ -0.29
SHMT2-213ENST00000554600 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 CDCA5Q96FF9 252 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-213ENST00000554600 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
SHMT2-213ENST00000554600 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
SHMT2-213ENST00000554600 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
SHMT2-213ENST00000554600 MYO1BO43795 1136 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
SHMT2-213ENST00000554600 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
SHMT2-213ENST00000554600 ECE1P42892 770 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 HUNKP57058 714 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 G3BP1Q13283 466 aaKnown RBP eCLIP13.22□□□□□ -0.298e-8■■■□□ 16.6
SHMT2-213ENST00000554600 OS9Q13438 667 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-213ENST00000554600 MTX1Q13505 466 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 CYP4F22Q6NT55 531 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 CAPNS2Q96L46 248 aa13.22□□□□□ -0.29
SHMT2-213ENST00000554600 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
SHMT2-213ENST00000554600 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 TFCP2Q12800 502 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-213ENST00000554600 PRAMEF18Q5VWM3 479 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
SHMT2-213ENST00000554600 TBC1D22AQ8WUA7 517 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 YTHDC1Q96MU7 727 aaKnown RBP13.21□□□□□ -0.29
SHMT2-213ENST00000554600 VEZTQ9HBM0 779 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 PCDHAC2Q9Y5I4 1007 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.29
SHMT2-213ENST00000554600 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
SHMT2-213ENST00000554600 NF2P35240 595 aa13.2□□□□□ -0.3
SHMT2-213ENST00000554600 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
SHMT2-213ENST00000554600 NEUROD6Q96NK8 337 aa13.2□□□□□ -0.3
SHMT2-213ENST00000554600 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
SHMT2-213ENST00000554600 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
SHMT2-213ENST00000554600 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
SHMT2-213ENST00000554600 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-213ENST00000554600 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
SHMT2-213ENST00000554600 ADORA1P30542 326 aa13.19□□□□□ -0.3
SHMT2-213ENST00000554600 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
SHMT2-213ENST00000554600 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
SHMT2-213ENST00000554600 ZBED3Q96IU2 234 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-213ENST00000554600 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-213ENST00000554600 THSD7BQ9C0I4 1608 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 AOC2O75106 756 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 PHKA1P46020 1223 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 CRKP46108 304 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 TIMM10P62072 90 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
SHMT2-213ENST00000554600 GRIK5Q16478 980 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms