RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 PRAMEF18Q5VWM3 479 aa13.99□□□□□ -0.17
ABCD4-221ENST00000554453 SCAF8Q9UPN6 1271 aaKnown RBP13.99□□□□□ -0.17
ABCD4-221ENST00000554453 FAM205AQ6ZU69 1335 aa13.98□□□□□ -0.17
ABCD4-221ENST00000554453 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
ABCD4-221ENST00000554453 KIF23Q02241 960 aaPredicted RBP13.98□□□□□ -0.17
ABCD4-221ENST00000554453 DLGAP5Q15398 846 aa13.98□□□□□ -0.17
ABCD4-221ENST00000554453 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
ABCD4-221ENST00000554453 SMC4Q9NTJ3 1288 aa13.98□□□□□ -0.17
ABCD4-221ENST00000554453 CAPN15O75808 1086 aa13.97□□□□□ -0.17
ABCD4-221ENST00000554453 SLC10A3P09131 477 aa13.97□□□□□ -0.17
ABCD4-221ENST00000554453 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
ABCD4-221ENST00000554453 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
ABCD4-221ENST00000554453 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
ABCD4-221ENST00000554453 THSD7BQ9C0I4 1608 aa13.97□□□□□ -0.17
ABCD4-221ENST00000554453 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
ABCD4-221ENST00000554453 UBE2Q2LH0YL09 131 aa13.96□□□□□ -0.17
ABCD4-221ENST00000554453 PDE8BO95263 885 aa13.96□□□□□ -0.17
ABCD4-221ENST00000554453 NF2P35240 595 aa13.96□□□□□ -0.17
ABCD4-221ENST00000554453 GYG1P46976 350 aa13.96□□□□□ -0.17
ABCD4-221ENST00000554453 APOBEC3FQ8IUX4 373 aaKnown RBP13.96□□□□□ -0.17
ABCD4-221ENST00000554453 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
ABCD4-221ENST00000554453 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
ABCD4-221ENST00000554453 RFX5P48382 616 aaPredicted RBP13.95□□□□□ -0.18
ABCD4-221ENST00000554453 CFAP100Q494V2 611 aa13.95□□□□□ -0.18
ABCD4-221ENST00000554453 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
ABCD4-221ENST00000554453 PRMT6Q96LA8 375 aaPredicted RBP13.95□□□□□ -0.18
ABCD4-221ENST00000554453 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
ABCD4-221ENST00000554453 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 F8W031 263 aaPredicted RBP13.94□□□□□ -0.18
ABCD4-221ENST00000554453 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
ABCD4-221ENST00000554453 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 RASAL3Q86YV0 1011 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 DEFB129Q9H1M3 183 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 RNF186Q9NXI6 227 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 HDAC5Q9UQL6 1122 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 JAG2Q9Y219 1238 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
ABCD4-221ENST00000554453 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 EYA2O00167 538 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 MYO1BO43795 1136 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 PTPN12Q05209 780 aaKnown RBP13.93□□□□□ -0.18
ABCD4-221ENST00000554453 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
ABCD4-221ENST00000554453 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 ARMC9Q7Z3E5 817 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 PPP2R3BQ9Y5P8 575 aa13.93□□□□□ -0.18
ABCD4-221ENST00000554453 A0A1B0GUL6 1792 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 TRPA1O75762 1119 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 FGFR2P21802 821 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 MAP3K11Q16584 847 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 VPS37DQ86XT2 251 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 ABHD8Q96I13 439 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 SERPINA10Q9UK55 444 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
ABCD4-221ENST00000554453 PAPPA2Q9BXP8 1791 aa13.91□□□□□ -0.18
ABCD4-221ENST00000554453 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
ABCD4-221ENST00000554453 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
ABCD4-221ENST00000554453 TM4SF4P48230 202 aa13.91□□□□□ -0.18
ABCD4-221ENST00000554453 BCAMP50895 628 aa13.91□□□□□ -0.18
ABCD4-221ENST00000554453 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■□□□□ 10.6
ABCD4-221ENST00000554453 HDLBPQ00341 1268 aaKnown RBP13.91□□□□□ -0.18
ABCD4-221ENST00000554453 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
ABCD4-221ENST00000554453 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
ABCD4-221ENST00000554453 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
ABCD4-221ENST00000554453 UNCXA6NJT0 531 aa13.9□□□□□ -0.18
ABCD4-221ENST00000554453 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.18
ABCD4-221ENST00000554453 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.18
ABCD4-221ENST00000554453 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
ABCD4-221ENST00000554453 ZNF70Q9UC06 446 aaPredicted RBP13.9□□□□□ -0.18
ABCD4-221ENST00000554453 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
ABCD4-221ENST00000554453 AOX1Q06278 1338 aa13.9□□□□□ -0.19
ABCD4-221ENST00000554453 KIF16BQ96L93 1317 aa13.9□□□□□ -0.19
ABCD4-221ENST00000554453 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
ABCD4-221ENST00000554453 FRAT2O75474 233 aaPredicted RBP13.89□□□□□ -0.19
ABCD4-221ENST00000554453 CIAO1O76071 339 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 PRKG1Q13976 671 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
ABCD4-221ENST00000554453 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
ABCD4-221ENST00000554453 LPIN2Q92539 896 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 SLC10A4Q96EP9 437 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 CEP126Q9P2H0 1117 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
ABCD4-221ENST00000554453 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
ABCD4-221ENST00000554453 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
ABCD4-221ENST00000554453 CRKP46108 304 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 CHAF1AQ13111 956 aaPredicted RBP13.88□□□□□ -0.19
ABCD4-221ENST00000554453 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 RASA3Q14644 834 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 GRIK5Q16478 980 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 NBPF12Q5TAG4 269 aaPredicted RBP13.88□□□□□ -0.19
ABCD4-221ENST00000554453 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms