RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MRPL50Q8N5N7 158 aaKnown RBP23.67■■□□□ 1.38
CPSF2-203ENST00000554290 SUCLG2Q96I99 432 aa23.67■■□□□ 1.38
CPSF2-203ENST00000554290 UTYO14607 1347 aa23.66■■□□□ 1.38
CPSF2-203ENST00000554290 NBPF7P0C2Y1 421 aaPredicted RBP23.66■■□□□ 1.38
CPSF2-203ENST00000554290 UBE4AQ14139 1066 aa23.66■■□□□ 1.38
CPSF2-203ENST00000554290 MTMR14Q8NCE2 650 aa23.66■■□□□ 1.38
CPSF2-203ENST00000554290 PTPRCP08575 1304 aa23.65■■□□□ 1.38
CPSF2-203ENST00000554290 MYO1BO43795 1136 aa23.65■■□□□ 1.38
CPSF2-203ENST00000554290 ARMC9Q7Z3E5 817 aa23.65■■□□□ 1.38
CPSF2-203ENST00000554290 F8W031 263 aaPredicted RBP23.64■■□□□ 1.37
CPSF2-203ENST00000554290 KAZALD1Q96I82 304 aa23.64■■□□□ 1.37
CPSF2-203ENST00000554290 DEFB129Q9H1M3 183 aa23.63■■□□□ 1.37
CPSF2-203ENST00000554290 CASP8AP2Q9UKL3 1982 aa23.63■■□□□ 1.37
CPSF2-203ENST00000554290 HIBADHP31937 336 aaKnown RBP23.62■■□□□ 1.37
CPSF2-203ENST00000554290 CFAP100Q494V2 611 aa23.62■■□□□ 1.37
CPSF2-203ENST00000554290 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
CPSF2-203ENST00000554290 BICC1Q9H694 974 aaKnown RBP23.62■■□□□ 1.37
CPSF2-203ENST00000554290 PPP2R3BQ9Y5P8 575 aa23.62■■□□□ 1.37
CPSF2-203ENST00000554290 COL1A1P02452 1464 aaPredicted RBP23.62■■□□□ 1.37
CPSF2-203ENST00000554290 MROH5Q6ZUA9 1318 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 SLFN5Q08AF3 891 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 PRKG1Q13976 671 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
CPSF2-203ENST00000554290 TDRD7Q8NHU6 1098 aaKnown RBP23.61■■□□□ 1.37
CPSF2-203ENST00000554290 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 JAG2Q9Y219 1238 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 RIPOR2Q9Y4F9 1068 aa23.61■■□□□ 1.37
CPSF2-203ENST00000554290 FAM205AQ6ZU69 1335 aa23.6■■□□□ 1.37
CPSF2-203ENST00000554290 SPDYE2BA6NHP3 402 aa23.6■■□□□ 1.37
CPSF2-203ENST00000554290 SPDYE6P0CI01 402 aa23.6■■□□□ 1.37
CPSF2-203ENST00000554290 GYG1P46976 350 aa23.6■■□□□ 1.37
CPSF2-203ENST00000554290 RBM5P52756 815 aaKnown RBP eCLIP23.6■■□□□ 1.37
CPSF2-203ENST00000554290 PTPN12Q05209 780 aaKnown RBP23.6■■□□□ 1.37
CPSF2-203ENST00000554290 ANGEL1Q9UNK9 670 aaKnown RBP23.6■■□□□ 1.37
CPSF2-203ENST00000554290 LDLRAD1Q5T700 205 aa23.59■■□□□ 1.37
CPSF2-203ENST00000554290 FAM84BQ96KN1 310 aaPredicted RBP23.59■■□□□ 1.37
CPSF2-203ENST00000554290 PRMT6Q96LA8 375 aaPredicted RBP23.59■■□□□ 1.37
CPSF2-203ENST00000554290 A0A1B0GUL6 1792 aa23.59■■□□□ 1.37
CPSF2-203ENST00000554290 AKAP11Q9UKA4 1901 aa23.59■■□□□ 1.37
CPSF2-203ENST00000554290 TM4SF4P48230 202 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 SREBF2Q12772 1141 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 ALDH1L2Q3SY69 923 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 SUPT20HL1Q3ZLR7 823 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 MFSD14BQ5SR56 506 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 ANKRD44Q8N8A2 993 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 PCDHAC2Q9Y5I4 1007 aa23.58■■□□□ 1.37
CPSF2-203ENST00000554290 CLRN2A0PK11 232 aa23.57■■□□□ 1.36
CPSF2-203ENST00000554290 PPP1R12BO60237 982 aaPredicted RBP23.57■■□□□ 1.36
CPSF2-203ENST00000554290 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
CPSF2-203ENST00000554290 VPS37DQ86XT2 251 aa23.57■■□□□ 1.36
CPSF2-203ENST00000554290 VEZTQ9HBM0 779 aa23.57■■□□□ 1.36
CPSF2-203ENST00000554290 MKRN3Q13064 507 aaKnown RBP23.56■■□□□ 1.36
CPSF2-203ENST00000554290 CAVIN4Q5BKX8 364 aa23.56■■□□□ 1.36
CPSF2-203ENST00000554290 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
CPSF2-203ENST00000554290 USP44Q9H0E7 712 aa23.56■■□□□ 1.36
CPSF2-203ENST00000554290 SERPINA10Q9UK55 444 aa23.56■■□□□ 1.36
CPSF2-203ENST00000554290 RGS19P49795 217 aa23.55■■□□□ 1.36
CPSF2-203ENST00000554290 LRRC24Q50LG9 513 aa23.55■■□□□ 1.36
CPSF2-203ENST00000554290 CTU1Q7Z7A3 348 aaKnown RBP23.55■■□□□ 1.36
CPSF2-203ENST00000554290 TTF2Q9UNY4 1162 aaKnown RBP23.55■■□□□ 1.36
CPSF2-203ENST00000554290 UNCXA6NJT0 531 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
CPSF2-203ENST00000554290 PDE8BO95263 885 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 MLLT1Q03111 559 aaPredicted RBP23.54■■□□□ 1.36
CPSF2-203ENST00000554290 TNFAIP1Q13829 316 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 MAP3K11Q16584 847 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 SMC4Q9NTJ3 1288 aa23.54■■□□□ 1.36
CPSF2-203ENST00000554290 TBC1D8O95759 1140 aa23.53■■□□□ 1.36
CPSF2-203ENST00000554290 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
CPSF2-203ENST00000554290 FZD1Q9UP38 647 aa23.53■■□□□ 1.36
CPSF2-203ENST00000554290 INHBEP58166 350 aa23.52■■□□□ 1.36
CPSF2-203ENST00000554290 RASA3Q14644 834 aa23.52■■□□□ 1.36
CPSF2-203ENST00000554290 TBC1D22AQ8WUA7 517 aa23.52■■□□□ 1.36
CPSF2-203ENST00000554290 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
CPSF2-203ENST00000554290 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
CPSF2-203ENST00000554290 NBPF12Q5TAG4 269 aaPredicted RBP23.51■■□□□ 1.35
CPSF2-203ENST00000554290 VGLL2Q8N8G2 317 aa23.51■■□□□ 1.35
CPSF2-203ENST00000554290 ZNF70Q9UC06 446 aaPredicted RBP23.51■■□□□ 1.35
CPSF2-203ENST00000554290 IQSEC3Q9UPP2 1182 aaPredicted RBP23.51■■□□□ 1.35
CPSF2-203ENST00000554290 MANSC4A6NHS7 340 aaPredicted RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 ALDH1A1P00352 501 aa23.5■■□□□ 1.35
CPSF2-203ENST00000554290 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 CHAF1AQ13111 956 aaPredicted RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 SPDYE2Q495Y8 402 aa23.5■■□□□ 1.35
CPSF2-203ENST00000554290 NOM1Q5C9Z4 860 aaKnown RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 DZIP1LQ8IYY4 767 aaKnown RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 TRMT2AQ8IZ69 625 aaKnown RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 KLHDC4Q8TBB5 520 aa23.5■■□□□ 1.35
CPSF2-203ENST00000554290 TDRD3Q9H7E2 651 aaKnown RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.5■■□□□ 1.35
CPSF2-203ENST00000554290 AOX1Q06278 1338 aa23.5■■□□□ 1.35
CPSF2-203ENST00000554290 IFIT1P09914 478 aaKnown RBP23.49■■□□□ 1.35
CPSF2-203ENST00000554290 CRKP46108 304 aa23.49■■□□□ 1.35
CPSF2-203ENST00000554290 ZNF296Q8WUU4 475 aaPredicted RBP23.49■■□□□ 1.35
CPSF2-203ENST00000554290 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
CPSF2-203ENST00000554290 SSC5DA1L4H1 1573 aa23.48■■□□□ 1.35
CPSF2-203ENST00000554290 GPR25O00155 361 aa23.48■■□□□ 1.35
CPSF2-203ENST00000554290 TNNI2P48788 182 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms