RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 MBIPQ9NS73 344 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 IFT57Q9NWB7 429 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 XDHP47989 1333 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 UBE2Q2LH0YL09 131 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 USP17L8P0C7I0 530 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 MFAP1P55081 439 aaKnown RBP8.8□□□□□ -1
MTHFD1-205ENST00000554057 SKOR2Q2VWA4 1001 aaPredicted RBP8.8□□□□□ -1
MTHFD1-205ENST00000554057 PRAMEF18Q5VWM3 479 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 CHD1LQ86WJ1 897 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 GMLQ99445 158 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
MTHFD1-205ENST00000554057 PITPNM2Q9BZ72 1349 aa8.8□□□□□ -1
MTHFD1-205ENST00000554057 USP17L3A6NCW0 530 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 USP17L4A6NCW7 530 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 ELL2O00472 640 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 PDE8AO60658 829 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 PCCAP05165 728 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 DDIT3P35638 169 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 MRE11P49959 708 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 FKBP1BP68106 108 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 MKRN3Q13064 507 aaKnown RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 NBPF9Q3BBW0 867 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 USP17L1Q7RTZ2 530 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 ANKRD18AQ8IVF6 992 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 ZNF296Q8WUU4 475 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 FBXW7Q969H0 707 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 MXD3Q9BW11 206 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 API5Q9BZZ5 524 aaKnown RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 CWC25Q9NXE8 425 aaPredicted RBP8.79□□□□□ -1
MTHFD1-205ENST00000554057 PCDH10Q9P2E7 1040 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 HDAC9Q9UKV0 1011 aa8.79□□□□□ -1
MTHFD1-205ENST00000554057 MED23Q9ULK4 1368 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
MTHFD1-205ENST00000554057 TRAK2O60296 914 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 SASH1O94885 1247 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 TBC1D8O95759 1140 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 ZNF853P0CG23 659 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 HSP90B1P14625 803 aaKnown RBP8.78□□□□□ -1
MTHFD1-205ENST00000554057 ATP2B4P23634 1241 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 CTSWP56202 376 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
MTHFD1-205ENST00000554057 CCDC191Q8NCU4 936 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 GBP4Q96PP9 640 aa8.78□□□□□ -1
MTHFD1-205ENST00000554057 VAMP4O75379 141 aa8.77□□□□□ -1.01
MTHFD1-205ENST00000554057 PODNQ7Z5L7 613 aa8.77□□□□□ -1.01
MTHFD1-205ENST00000554057 REM2Q8IYK8 340 aaPredicted RBP8.77□□□□□ -1.01
MTHFD1-205ENST00000554057 CDC5LQ99459 802 aaKnown RBP8.77□□□□□ -1.01
MTHFD1-205ENST00000554057 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
MTHFD1-205ENST00000554057 GPR25O00155 361 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 WNT10BO00744 389 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 PRKG1Q13976 671 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 DACT2Q5SW24 774 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 C8orf58Q8NAV2 365 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 GREM2Q9H772 168 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 MINPP1Q9UNW1 487 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 MAP3K2Q9Y2U5 619 aa8.76□□□□□ -1.01
MTHFD1-205ENST00000554057 CDC45O75419 566 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 IGKV5-2P06315 115 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 KLRK1P26718 216 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 NF2P35240 595 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 CCT4P50991 539 aaKnown RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 PTPN12Q05209 780 aaKnown RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 PKN2Q16513 984 aaKnown RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 FBXO46Q6PJ61 603 aaPredicted RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 CLEC17AQ6ZS10 378 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 TXNRD3Q86VQ6 643 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 TTLL11Q8NHH1 800 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 FZD1Q9UP38 647 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 LAMB1P07942 1786 aa8.75□□□□□ -1.01
MTHFD1-205ENST00000554057 KIAA0100Q14667 2235 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 PI4KAP2A4QPH2 592 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 FKTNO75072 461 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 XRCC6P12956 609 aaKnown RBP eCLIP8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 TM4SF4P48230 202 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 RAB3GAP1Q15042 981 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 CWF19L2Q2TBE0 894 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 ANKRD45Q5TZF3 282 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 STRIP1Q5VSL9 837 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 ARMC9Q7Z3E5 817 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 UBE3BQ7Z3V4 1068 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 APOBEC3FQ8IUX4 373 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 KIAA0825Q8IV33 1275 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 PI4KAP1Q8N8J0 262 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 COA1Q9GZY4 146 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 MYO3BQ8WXR4 1341 aa8.74□□□□□ -1.01
MTHFD1-205ENST00000554057 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
MTHFD1-205ENST00000554057 CACNA1FO60840 1977 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms